| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977092
Identifier: 156977092
GI number: 156977092
Start: 1072915
End: 1074612
Strand: Reverse
Name: 156977092
Synonym: VIBHAR_05877
Alternate gene names: NA
Gene position: 1074612-1072915 (Counterclockwise)
Preceding gene: 156977093
Following gene: 156977091
Centisome position: 48.76
GC content: 45.47
Gene sequence:
>1698_bases ATGCATTTAGTTTGCAAATTTATACCTAGCTCGAAGCTTTCCTCCAACGAGCTATCCTACGTCCTTACACCTGATGAATG TATAGGGCAGCTTTCGCGTGTGCGAAATTCAGAAAATATTCTCAGAAACCTGCCTAAAGAGCTTGCTCAGAAGATCTCAA TCTCTGCCAAAAAGTCTAGCGCCGGCTTGCTAACGGCTATTCGAAATGAGCTAGGAAATGGTAACTGGGTGGCGTTGTCT TCCTTCTCTCGTAGAACGCCGTTAACGGATGCTCAATTACAAAGTTTCCCAAGACTAAAAGCACAGCTTGAATCTGTCTC ATCGACTGGTGAGAGTAAAGTTTATAAAGCAGGTTATAAGCAGGTAACGGACGATGTGACATTGGTTCGCAGTTACGCGC ATGTGCCTTATGAACCAAGTCCAGAACATAAAATCGTTGTCGAGTTTGCTGGGCAGTGGTCTAGCAATGCAGCCTGTTTG ATGTTGGGAAAAACCGACGCACAAAAAGAAAAAGTGACTGTAAGTAAGGCTGATACCGAGAACAAACACCGCAGCCTTGC CACGTTTAAAGATCTGGATGCTGAAGGCAAAACGCTTTATATCAAAATCCCTTGTTCCGACCAGCCTCAGCCAATCTTGC TTAAACTCGCTGAAGACCTGCAACCAGTCGATAAAGAAACTCAGATGGATGAGTGGGATAACGTGTTGGTGCCGGTCAGA CCTTTGGCTTACTTAGATGGTAGCAACGACAAAGCAAAAGCTTCTGACCTGCGTGGTGGTTTCCTTTATGTGTTTTGGAA AGGAAAGCTTTGGCGAGAGATGGCGATAAACGAGAAAGGTTACTACCAAGATGTTGACGTCGAGTATTACCGCACGCTAG AGCAAGAAGAAAAGAAAAAAGACACACCTCAGGTAATACAAAGAAGCGCAAGCGGTTTTGCTATGGCGCATTTCTGGGCA CCTTACAAAATATCGGGTGAAGTCCAACAGGGAGAAAATGGACTCAAGTTCATTTTCTCACCAAAGCAAAAGCGCTTTGC TCAAATTGAAGCATTAGAATCAGATGCTGCTTTGCTTGAGAAATCCAGCACACCATTAGATGAATTAAGCAGTTACAGTG ACGCACAGTCATTCAGTTCACAAGAATTCACCTCCGATGTAGACAGTGCCGCCATCCACAAAGTTACCGAAGACGACATG CCATGGCTGAGTGACCAACAAGCCATCGTTCGCAGTTATGACCAGAGTAATACGGTCATTGCTTATGTGGATGGCAAAAA CAGTGGTTTTCTTGTCCGTTTGGAAGTTGGCTTGGCAGATGGCCCATTGGCAGAACAGCTAGACCCTTACTCGTTGGCTT CGTATGACGGCTTGGTTGCCATTATGGAGGATTCTGAAAGTGACTGGCGAGTGACCGAGCCCTTTGAGTTAATCAGTAAG GATGGTTATATCAGTGCCTTAGTGACAGGTATGCCTCCCAAAGGAAAGTTTACACTTGTGCTTTCGCACCTTGGGGGGCA AGACAGCGAGGTGATGATGTTTGAAGGGCTGACGTACCAAGAGATCACCGCAGAACCACCAGAATTACCGATGGCTTCTA AGCACGAAGAACAGCGAGTGCCTGATGAAGTTAATGAAGAAAGAGAGCGTCAAAAGAAGACATTAGACATGATGCTAGAG CTTATCAACGCCAATTAA
Upstream 100 bases:
>100_bases ATTAAATTAGTAGCATTAACGCACCAAATCGTACCAGTAAGCCTTATCAGCTTAAACGTCACCGCAACCATATTTACGAT GTTGGTTGTGGAGAATTCAA
Downstream 100 bases:
>100_bases AGTGATAACACGGGGAGTGTGCTTTAGACCTCGGTTTATCAAATCATGAAGAGAATGAGCGAAATATGAAAAAAATCATA ATAGGCAGCACCATTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MHLVCKFIPSSKLSSNELSYVLTPDECIGQLSRVRNSENILRNLPKELAQKISISAKKSSAGLLTAIRNELGNGNWVALS SFSRRTPLTDAQLQSFPRLKAQLESVSSTGESKVYKAGYKQVTDDVTLVRSYAHVPYEPSPEHKIVVEFAGQWSSNAACL MLGKTDAQKEKVTVSKADTENKHRSLATFKDLDAEGKTLYIKIPCSDQPQPILLKLAEDLQPVDKETQMDEWDNVLVPVR PLAYLDGSNDKAKASDLRGGFLYVFWKGKLWREMAINEKGYYQDVDVEYYRTLEQEEKKKDTPQVIQRSASGFAMAHFWA PYKISGEVQQGENGLKFIFSPKQKRFAQIEALESDAALLEKSSTPLDELSSYSDAQSFSSQEFTSDVDSAAIHKVTEDDM PWLSDQQAIVRSYDQSNTVIAYVDGKNSGFLVRLEVGLADGPLAEQLDPYSLASYDGLVAIMEDSESDWRVTEPFELISK DGYISALVTGMPPKGKFTLVLSHLGGQDSEVMMFEGLTYQEITAEPPELPMASKHEEQRVPDEVNEERERQKKTLDMMLE LINAN
Sequences:
>Translated_565_residues MHLVCKFIPSSKLSSNELSYVLTPDECIGQLSRVRNSENILRNLPKELAQKISISAKKSSAGLLTAIRNELGNGNWVALS SFSRRTPLTDAQLQSFPRLKAQLESVSSTGESKVYKAGYKQVTDDVTLVRSYAHVPYEPSPEHKIVVEFAGQWSSNAACL MLGKTDAQKEKVTVSKADTENKHRSLATFKDLDAEGKTLYIKIPCSDQPQPILLKLAEDLQPVDKETQMDEWDNVLVPVR PLAYLDGSNDKAKASDLRGGFLYVFWKGKLWREMAINEKGYYQDVDVEYYRTLEQEEKKKDTPQVIQRSASGFAMAHFWA PYKISGEVQQGENGLKFIFSPKQKRFAQIEALESDAALLEKSSTPLDELSSYSDAQSFSSQEFTSDVDSAAIHKVTEDDM PWLSDQQAIVRSYDQSNTVIAYVDGKNSGFLVRLEVGLADGPLAEQLDPYSLASYDGLVAIMEDSESDWRVTEPFELISK DGYISALVTGMPPKGKFTLVLSHLGGQDSEVMMFEGLTYQEITAEPPELPMASKHEEQRVPDEVNEERERQKKTLDMMLE LINAN >Mature_565_residues MHLVCKFIPSSKLSSNELSYVLTPDECIGQLSRVRNSENILRNLPKELAQKISISAKKSSAGLLTAIRNELGNGNWVALS SFSRRTPLTDAQLQSFPRLKAQLESVSSTGESKVYKAGYKQVTDDVTLVRSYAHVPYEPSPEHKIVVEFAGQWSSNAACL MLGKTDAQKEKVTVSKADTENKHRSLATFKDLDAEGKTLYIKIPCSDQPQPILLKLAEDLQPVDKETQMDEWDNVLVPVR PLAYLDGSNDKAKASDLRGGFLYVFWKGKLWREMAINEKGYYQDVDVEYYRTLEQEEKKKDTPQVIQRSASGFAMAHFWA PYKISGEVQQGENGLKFIFSPKQKRFAQIEALESDAALLEKSSTPLDELSSYSDAQSFSSQEFTSDVDSAAIHKVTEDDM PWLSDQQAIVRSYDQSNTVIAYVDGKNSGFLVRLEVGLADGPLAEQLDPYSLASYDGLVAIMEDSESDWRVTEPFELISK DGYISALVTGMPPKGKFTLVLSHLGGQDSEVMMFEGLTYQEITAEPPELPMASKHEEQRVPDEVNEERERQKKTLDMMLE LINAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63252; Mature: 63252
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVCKFIPSSKLSSNELSYVLTPDECIGQLSRVRNSENILRNLPKELAQKISISAKKSS CCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC AGLLTAIRNELGNGNWVALSSFSRRTPLTDAQLQSFPRLKAQLESVSSTGESKVYKAGYK CHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QVTDDVTLVRSYAHVPYEPSPEHKIVVEFAGQWSSNAACLMLGKTDAQKEKVTVSKADTE HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCC NKHRSLATFKDLDAEGKTLYIKIPCSDQPQPILLKLAEDLQPVDKETQMDEWDNVLVPVR HHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECC PLAYLDGSNDKAKASDLRGGFLYVFWKGKLWREMAINEKGYYQDVDVEYYRTLEQEEKKK EEEEECCCCCCCHHHHCCCCEEEEEECCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHCC DTPQVIQRSASGFAMAHFWAPYKISGEVQQGENGLKFIFSPKQKRFAQIEALESDAALLE CCHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH KSSTPLDELSSYSDAQSFSSQEFTSDVDSAAIHKVTEDDMPWLSDQQAIVRSYDQSNTVI CCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEE AYVDGKNSGFLVRLEVGLADGPLAEQLDPYSLASYDGLVAIMEDSESDWRVTEPFELISK EEEECCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCEECCCHHHHCC DGYISALVTGMPPKGKFTLVLSHLGGQDSEVMMFEGLTYQEITAEPPELPMASKHEEQRV CCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHCC PDEVNEERERQKKTLDMMLELINAN CHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLVCKFIPSSKLSSNELSYVLTPDECIGQLSRVRNSENILRNLPKELAQKISISAKKSS CCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC AGLLTAIRNELGNGNWVALSSFSRRTPLTDAQLQSFPRLKAQLESVSSTGESKVYKAGYK CHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QVTDDVTLVRSYAHVPYEPSPEHKIVVEFAGQWSSNAACLMLGKTDAQKEKVTVSKADTE HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCC NKHRSLATFKDLDAEGKTLYIKIPCSDQPQPILLKLAEDLQPVDKETQMDEWDNVLVPVR HHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECC PLAYLDGSNDKAKASDLRGGFLYVFWKGKLWREMAINEKGYYQDVDVEYYRTLEQEEKKK EEEEECCCCCCCHHHHCCCCEEEEEECCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHCC DTPQVIQRSASGFAMAHFWAPYKISGEVQQGENGLKFIFSPKQKRFAQIEALESDAALLE CCHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH KSSTPLDELSSYSDAQSFSSQEFTSDVDSAAIHKVTEDDMPWLSDQQAIVRSYDQSNTVI CCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEE AYVDGKNSGFLVRLEVGLADGPLAEQLDPYSLASYDGLVAIMEDSESDWRVTEPFELISK EEEECCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCEECCCHHHHCC DGYISALVTGMPPKGKFTLVLSHLGGQDSEVMMFEGLTYQEITAEPPELPMASKHEEQRV CCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHCC PDEVNEERERQKKTLDMMLELINAN CHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA