| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is insG [H]
Identifier: 156977093
GI number: 156977093
Start: 1075372
End: 1076697
Strand: Reverse
Name: insG [H]
Synonym: VIBHAR_05878
Alternate gene names: 156977093
Gene position: 1076697-1075372 (Counterclockwise)
Preceding gene: 156977094
Following gene: 156977092
Centisome position: 48.85
GC content: 43.21
Gene sequence:
>1326_bases ATGCACGTTTCTCAAGCCCTCGACATCATCAACAGTTATAAACCCAATCAAGTTGAAACACTCGCTGACCTCCTGCCCAT TGAACTCATTAATAGTGCTTACGAACTTACTGATACTGTTACGCTAAGAAAACGAAAGCTAACTTTAGAGTCGATGGCAT GGTTACTGGTTGGAATGGCAATCTATAACGATAAATCCATGGCTGACATTGTAAATATGCTCGATATTGTTGACCGCACA GGTAAACCATTTGTTGCTCCAAGTGCATTAACACAGCGAAGAAAAAACCTTGGTGAGTCAGCGGCTAAAGCTCTTTTTGA GTGTACCCAGAGTCATTGGTTTAAACAGGCTAATTTACCAAACTGGAACGGACTCACTCTTCTTGGCGTTGATGGTGTCT TGTGGCGAACTGAGGATTCAAAAGAGAACGCTGCAACGTTTGCAAAGCCTACCAATCGTGACGGAAAAGAAACACAGTAC CCACAAGTACGCATGGTATGTCAGATGGAATTGAGCAGCCATTTAATCACAGGCAGTGCCTTTGACTGTTATAGCGTCAA TGAAATGAAGTTAGCAGAGCAACTGATAGAGACGACACCTGATAATAGTTTAACCCTTTTTGATAAAGGCTTTTACTCCC TTGGCCTACTTCAAGCATGGAGCTCGCAAGGCATAAATCGACATTGGCTTATCCCAATGAAAAAAGGACTTACTTATGAC GTCGTTCAGTCTCTTGGCCGCCAAGATAAACTGATAAAGCTGAAGAGTAATCCGCAAGCACGTAAAAAGTGGCCAGAGCT AGAACAAGAAGTGGTTGTACGTTTAATCACGAGAGTCAAAGATGGCAAGCAATACGATGTTCTCACCTCAATGCTTGACC CTATGCTCTACCCAAAGTCAGATATCGTAGGCTTATATGGGTATCGTTGGGAAATTGAACTCGGATACCGTGAGCAAAAA CAGTACATGCTTGGTAACCGACTCACGCTTCGAAGTCGACTCCCTGAATTAGTGAAGCAAGAACTCTGGGGAATACTACT GACCTATAACTTGATCAGGTATCAAATGGTGCAGATGTGTAATACGTTGAATGGTGATTACTTGCCATATCAACTTAGCT TCAATGGAGCACTAGCTCACATCATGCGCCTGATAGTGGGACTTCCATACTCGTCACCAGGAGCAATCCCGAGGCAACTC GAAAACTTCTACTCAATGAGTGAGAGCTTAATACTTGAACCTAGGAGAGAAAGATCCTTCCCTAGAGTCGTTAAGAAAAA GCCAAGCCGATACCCTAGAAAAAACAATGCCGATCACCTTAAGTGA
Upstream 100 bases:
>100_bases GATGCTCTAATGCCGATCAGTTAAGACTTTAATCGGCAGATCAGTTGAATGATCCTACCTGTATGTAAAAATCCGATAGA CCCTGTTTATCGGATTTTTT
Downstream 100 bases:
>100_bases ACGGCATTAGAGCATTAAGCTCGCTTTTTTTGTCAGTATTTAAGTGATCTAAGTCAAATTATTCGTATTTTTCATAATTA AGCCAAATGAATCGACGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MHVSQALDIINSYKPNQVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMAIYNDKSMADIVNMLDIVDRT GKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQY PQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLTYD VVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKSDIVGLYGYRWEIELGYREQK QYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQL ENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK
Sequences:
>Translated_441_residues MHVSQALDIINSYKPNQVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMAIYNDKSMADIVNMLDIVDRT GKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQY PQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLTYD VVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKSDIVGLYGYRWEIELGYREQK QYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQL ENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK >Mature_441_residues MHVSQALDIINSYKPNQVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMAIYNDKSMADIVNMLDIVDRT GKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQY PQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLTYD VVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKSDIVGLYGYRWEIELGYREQK QYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQL ENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=434, Percent_Identity=51.8433179723502, Blast_Score=449, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 50708; Mature: 50708
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVSQALDIINSYKPNQVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMA CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLP HHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSA CCCCEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCC FDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLTYD CCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH VVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKS HHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC DIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMC CEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRERSF HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCC PRVVKKKPSRYPRKNNADHLK HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MHVSQALDIINSYKPNQVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMA CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLP HHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSA CCCCEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCC FDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLTYD CCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH VVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKS HHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC DIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMC CEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRERSF HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCC PRVVKKKPSRYPRKNNADHLK HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]