| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977091
Identifier: 156977091
GI number: 156977091
Start: 1071536
End: 1072849
Strand: Reverse
Name: 156977091
Synonym: VIBHAR_05876
Alternate gene names: NA
Gene position: 1072849-1071536 (Counterclockwise)
Preceding gene: 156977092
Following gene: 156977090
Centisome position: 48.68
GC content: 41.7
Gene sequence:
>1314_bases ATGAAAAAAATCATAATAGGCAGCACCATTGTTGCTGCCTTATTGGCTGGGGTTGGTGTGATACATTGGCAAAGTAAGCC TCCAATGGATAAAAATTACATCTCAAACCTTCGCGGAATAGTACAATCTACATCGTATAGCAATCAAAGGGACACGATTT CAAAAATTCGGGGATGGCAAATCGAAATAGAAACCCTTGAAGGTGTTCCCAAGGAAGAGTGGAACTCAAAGCACACTCAA CCTCAAGTGATGTTTAACTATGGACCAGATTCTACCATCTATACTATGAACCTAGATGGAACGGATGTCCGGTTGTTACT TCATCGCGACGAATTTGGTGAATTACCAGCAGGGGGGAATGATATCCAGCGTTCTCCTAATGGGAGATATCTAGCGTTTC GCTATTATGGTTATGGAGCATGGGCTAATTGCGCTGTTTATGATTTAAAGAAAAGAGAAACCATCGTTAAGGCGGAGTTT TGCACGTCGGCGACCTTTACTCAAGATAGTAAAGAGTTCTATTTTATTGACTCTGATAGTCGTAACCCACAGCGCCTTGA ACTCGAAAGCCACAATCGAAGTGACGTATTTCAATCTGCGATCCACGTTGATAAAGAAACCTTCAATCCGCTGCGTGATG GTTATGCTTTCTTTATTGACCAGGTGAATGACCGATTTATCTATAAAGTAAGAAAAATAGATGATGCCGATAACCAAGGC CCTGCTCAGCAATTAGTGTTCCGTTTTTCAGATATGTCTTTACTTGGTAAAAAAGAGTATTTAGCTCCTGAATGTTTGAC CCGTTTTACCAAAGGAGCGCTGCAGAAGTATCTAGCCTGTAATCAACGCAAACCCTACAACTTATACTCACTTGAAGACC CTCAGAAAAAAATTGAACAGGTGCCAGAAAGGTATGTTTTTCAGCGAGGTAAGTGGTATGCGAGAGCAAATGGCAATAAA ATTGTTCGTCTGAAACAGCCCGGAGAAGCGGGAATGTTTGATGGCTTGGGCTATTACTATGCGTTAAAAACGGGGGATGG TGAGTTCGACTATGACCGACTTCATCGCTTAAGCTTCTTTATCCCTTTATATATGTATGCAGACTTTGAAAGTATGGATT TGCGTCCTTTTATGCCTCCTATCCCTACCAAAGAGCAATTTGAAGAACTCTTACCAGACGTTACAGAAAAGTTACGTCGA CACTGTGCTCGCAGTCGGGCTGGTTTCAAGAGCTGTGCTCAGTTTTACGATATGAAAGCGCTGTTTAAAGATATGGATCA AGTAAGGGAATATATGGGGGTGAAGAAATGGTAA
Upstream 100 bases:
>100_bases TAGACATGATGCTAGAGCTTATCAACGCCAATTAAAGTGATAACACGGGGAGTGTGCTTTAGACCTCGGTTTATCAAATC ATGAAGAGAATGAGCGAAAT
Downstream 100 bases:
>100_bases AACGTTACGATATTCCGGGCCTTTATCTAATGGGAAGATTGCATGACAGGGATGGCAAACCCGTTGGGCGCTTTTTCCCA TTAGCCCATGAAACATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKKIIIGSTIVAALLAGVGVIHWQSKPPMDKNYISNLRGIVQSTSYSNQRDTISKIRGWQIEIETLEGVPKEEWNSKHTQ PQVMFNYGPDSTIYTMNLDGTDVRLLLHRDEFGELPAGGNDIQRSPNGRYLAFRYYGYGAWANCAVYDLKKRETIVKAEF CTSATFTQDSKEFYFIDSDSRNPQRLELESHNRSDVFQSAIHVDKETFNPLRDGYAFFIDQVNDRFIYKVRKIDDADNQG PAQQLVFRFSDMSLLGKKEYLAPECLTRFTKGALQKYLACNQRKPYNLYSLEDPQKKIEQVPERYVFQRGKWYARANGNK IVRLKQPGEAGMFDGLGYYYALKTGDGEFDYDRLHRLSFFIPLYMYADFESMDLRPFMPPIPTKEQFEELLPDVTEKLRR HCARSRAGFKSCAQFYDMKALFKDMDQVREYMGVKKW
Sequences:
>Translated_437_residues MKKIIIGSTIVAALLAGVGVIHWQSKPPMDKNYISNLRGIVQSTSYSNQRDTISKIRGWQIEIETLEGVPKEEWNSKHTQ PQVMFNYGPDSTIYTMNLDGTDVRLLLHRDEFGELPAGGNDIQRSPNGRYLAFRYYGYGAWANCAVYDLKKRETIVKAEF CTSATFTQDSKEFYFIDSDSRNPQRLELESHNRSDVFQSAIHVDKETFNPLRDGYAFFIDQVNDRFIYKVRKIDDADNQG PAQQLVFRFSDMSLLGKKEYLAPECLTRFTKGALQKYLACNQRKPYNLYSLEDPQKKIEQVPERYVFQRGKWYARANGNK IVRLKQPGEAGMFDGLGYYYALKTGDGEFDYDRLHRLSFFIPLYMYADFESMDLRPFMPPIPTKEQFEELLPDVTEKLRR HCARSRAGFKSCAQFYDMKALFKDMDQVREYMGVKKW >Mature_437_residues MKKIIIGSTIVAALLAGVGVIHWQSKPPMDKNYISNLRGIVQSTSYSNQRDTISKIRGWQIEIETLEGVPKEEWNSKHTQ PQVMFNYGPDSTIYTMNLDGTDVRLLLHRDEFGELPAGGNDIQRSPNGRYLAFRYYGYGAWANCAVYDLKKRETIVKAEF CTSATFTQDSKEFYFIDSDSRNPQRLELESHNRSDVFQSAIHVDKETFNPLRDGYAFFIDQVNDRFIYKVRKIDDADNQG PAQQLVFRFSDMSLLGKKEYLAPECLTRFTKGALQKYLACNQRKPYNLYSLEDPQKKIEQVPERYVFQRGKWYARANGNK IVRLKQPGEAGMFDGLGYYYALKTGDGEFDYDRLHRLSFFIPLYMYADFESMDLRPFMPPIPTKEQFEELLPDVTEKLRR HCARSRAGFKSCAQFYDMKALFKDMDQVREYMGVKKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50898; Mature: 50898
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIIGSTIVAALLAGVGVIHWQSKPPMDKNYISNLRGIVQSTSYSNQRDTISKIRGWQ CCEEEEHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCE IEIETLEGVPKEEWNSKHTQPQVMFNYGPDSTIYTMNLDGTDVRLLLHRDEFGELPAGGN EEEEECCCCCCHHCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCC DIQRSPNGRYLAFRYYGYGAWANCAVYDLKKRETIVKAEFCTSATFTQDSKEFYFIDSDS CCCCCCCCCEEEEEEECCCCCCCEEEEECHHHHHEEEHHHHCCCCCCCCCCEEEEEECCC RNPQRLELESHNRSDVFQSAIHVDKETFNPLRDGYAFFIDQVNDRFIYKVRKIDDADNQG CCCCEEEECCCCHHHHHHHHHHCCHHHHCHHHCCHHEEHHCCCCEEEEEEEECCCCCCCC PAQQLVFRFSDMSLLGKKEYLAPECLTRFTKGALQKYLACNQRKPYNLYSLEDPQKKIEQ HHHHHHHHHHCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VPERYVFQRGKWYARANGNKIVRLKQPGEAGMFDGLGYYYALKTGDGEFDYDRLHRLSFF HHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH IPLYMYADFESMDLRPFMPPIPTKEQFEELLPDVTEKLRRHCARSRAGFKSCAQFYDMKA HHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LFKDMDQVREYMGVKKW HHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKIIIGSTIVAALLAGVGVIHWQSKPPMDKNYISNLRGIVQSTSYSNQRDTISKIRGWQ CCEEEEHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCE IEIETLEGVPKEEWNSKHTQPQVMFNYGPDSTIYTMNLDGTDVRLLLHRDEFGELPAGGN EEEEECCCCCCHHCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCC DIQRSPNGRYLAFRYYGYGAWANCAVYDLKKRETIVKAEFCTSATFTQDSKEFYFIDSDS CCCCCCCCCEEEEEEECCCCCCCEEEEECHHHHHEEEHHHHCCCCCCCCCCEEEEEECCC RNPQRLELESHNRSDVFQSAIHVDKETFNPLRDGYAFFIDQVNDRFIYKVRKIDDADNQG CCCCEEEECCCCHHHHHHHHHHCCHHHHCHHHCCHHEEHHCCCCEEEEEEEECCCCCCCC PAQQLVFRFSDMSLLGKKEYLAPECLTRFTKGALQKYLACNQRKPYNLYSLEDPQKKIEQ HHHHHHHHHHCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VPERYVFQRGKWYARANGNKIVRLKQPGEAGMFDGLGYYYALKTGDGEFDYDRLHRLSFF HHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH IPLYMYADFESMDLRPFMPPIPTKEQFEELLPDVTEKLRRHCARSRAGFKSCAQFYDMKA HHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LFKDMDQVREYMGVKKW HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA