Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977090

Identifier: 156977090

GI number: 156977090

Start: 1070448

End: 1071542

Strand: Reverse

Name: 156977090

Synonym: VIBHAR_05875

Alternate gene names: NA

Gene position: 1071542-1070448 (Counterclockwise)

Preceding gene: 156977091

Following gene: 156977089

Centisome position: 48.62

GC content: 42.74

Gene sequence:

>1095_bases
ATGGTAAAACGTTACGATATTCCGGGCCTTTATCTAATGGGAAGATTGCATGACAGGGATGGCAAACCCGTTGGGCGCTT
TTTCCCATTAGCCCATGAAACATTGGTCATTCCTAGCTTGGAAGTCAAACAGGAGTTTGTTGCAGACCACACTGTTACTA
ACAAGCAGATATCTACCAGCAGTAAAAATCCGATCGCGGTTAGTGATGAGTTGGGTAAGCTTAATATTTTAGCGGCTCGC
GAATTCAATGCTGATCAGATAGGCGCTGAGTTACTTAGGGCTCCTTTGGCAAAGGGGTGTGTGGAAGCCGCGATTAACAA
GGGCGCTGTGCAAGATGTGCTGTTTTTCCCAAGCTATTTGGTGCCATTAAGCCAGATGGCGAATACGGCCCAAGAAAGTA
AAGACCAGGAGCCTTGGTTAACTAAACTATATAACCTGTTGTCTTACAAAGATCTTAAGGAGATAAAAGATGATAAAGGG
CAATCTGCTTGTGTGACCGATTTAAGCGTTAAGCGCGTTAGTGTCGAGCAAGATTGCCTAGCTCCCCCCTCGGACCAATT
TGACAAAAGCAGTGGTTTCTTTAATAACTACGCAGAGTGGTACAATAAGAGCCACTCTAAACAGATACACGTAGTTGAAG
TTCCGCAGTTTTATACTATCCAGGTTGTTTTTTCTTCAAAGGATTATATTGGCGCTGAGGTGGCATTAGCCGATTTACCA
AAAGGCATTAATATCCAAGGATCTGAGACAGAGGGTCATGGTGTTTTACCCACATCAACGGTTAAAGAGATCTTGTACAA
GTACTCTACAGATGGTCAGGTTAGCCAAGACGAGCCTATGTATGTAGCAACGTTTTGGCTAAACTCGGAAAGTGTTTTAT
CGCTGAGTAGCCAAAATACTTCACTTCGAATCAATATAGATTTTTCGAAGAAAATCGATGAAGACGATACAAAACAGTTC
GCAACTATTCTTGATGCTAAAGGTATACCAAAAAGTTACAGTCTAAAAGAAAATGCCCTTGCTCTGGATATTCACACAAC
CGCGGGCGTACATCCGTTGTTAATGGCGATCCTATCTCCGTTGAAGAAGCTTTAA

Upstream 100 bases:

>100_bases
CTCGCAGTCGGGCTGGTTTCAAGAGCTGTGCTCAGTTTTACGATATGAAAGCGCTGTTTAAAGATATGGATCAAGTAAGG
GAATATATGGGGGTGAAGAA

Downstream 100 bases:

>100_bases
TTAACCACGCCCCACAATTCTTCCCTCATTTGAATGCCGATTTAGAAGCATTCCCTTACGACAGCCCAGCAAAGCTGATT
GAACGAAAGGAGATCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MVKRYDIPGLYLMGRLHDRDGKPVGRFFPLAHETLVIPSLEVKQEFVADHTVTNKQISTSSKNPIAVSDELGKLNILAAR
EFNADQIGAELLRAPLAKGCVEAAINKGAVQDVLFFPSYLVPLSQMANTAQESKDQEPWLTKLYNLLSYKDLKEIKDDKG
QSACVTDLSVKRVSVEQDCLAPPSDQFDKSSGFFNNYAEWYNKSHSKQIHVVEVPQFYTIQVVFSSKDYIGAEVALADLP
KGINIQGSETEGHGVLPTSTVKEILYKYSTDGQVSQDEPMYVATFWLNSESVLSLSSQNTSLRINIDFSKKIDEDDTKQF
ATILDAKGIPKSYSLKENALALDIHTTAGVHPLLMAILSPLKKL

Sequences:

>Translated_364_residues
MVKRYDIPGLYLMGRLHDRDGKPVGRFFPLAHETLVIPSLEVKQEFVADHTVTNKQISTSSKNPIAVSDELGKLNILAAR
EFNADQIGAELLRAPLAKGCVEAAINKGAVQDVLFFPSYLVPLSQMANTAQESKDQEPWLTKLYNLLSYKDLKEIKDDKG
QSACVTDLSVKRVSVEQDCLAPPSDQFDKSSGFFNNYAEWYNKSHSKQIHVVEVPQFYTIQVVFSSKDYIGAEVALADLP
KGINIQGSETEGHGVLPTSTVKEILYKYSTDGQVSQDEPMYVATFWLNSESVLSLSSQNTSLRINIDFSKKIDEDDTKQF
ATILDAKGIPKSYSLKENALALDIHTTAGVHPLLMAILSPLKKL
>Mature_364_residues
MVKRYDIPGLYLMGRLHDRDGKPVGRFFPLAHETLVIPSLEVKQEFVADHTVTNKQISTSSKNPIAVSDELGKLNILAAR
EFNADQIGAELLRAPLAKGCVEAAINKGAVQDVLFFPSYLVPLSQMANTAQESKDQEPWLTKLYNLLSYKDLKEIKDDKG
QSACVTDLSVKRVSVEQDCLAPPSDQFDKSSGFFNNYAEWYNKSHSKQIHVVEVPQFYTIQVVFSSKDYIGAEVALADLP
KGINIQGSETEGHGVLPTSTVKEILYKYSTDGQVSQDEPMYVATFWLNSESVLSLSSQNTSLRINIDFSKKIDEDDTKQF
ATILDAKGIPKSYSLKENALALDIHTTAGVHPLLMAILSPLKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40376; Mature: 40376

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRYDIPGLYLMGRLHDRDGKPVGRFFPLAHETLVIPSLEVKQEFVADHTVTNKQISTS
CCEECCCCCEEEEEEEECCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCEECCC
SKNPIAVSDELGKLNILAAREFNADQIGAELLRAPLAKGCVEAAINKGAVQDVLFFPSYL
CCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VPLSQMANTAQESKDQEPWLTKLYNLLSYKDLKEIKDDKGQSACVTDLSVKRVSVEQDCL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHCC
APPSDQFDKSSGFFNNYAEWYNKSHSKQIHVVEVPQFYTIQVVFSSKDYIGAEVALADLP
CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEHHHCC
KGINIQGSETEGHGVLPTSTVKEILYKYSTDGQVSQDEPMYVATFWLNSESVLSLSSQNT
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC
SLRINIDFSKKIDEDDTKQFATILDAKGIPKSYSLKENALALDIHTTAGVHPLLMAILSP
EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
LKKL
HHCC
>Mature Secondary Structure
MVKRYDIPGLYLMGRLHDRDGKPVGRFFPLAHETLVIPSLEVKQEFVADHTVTNKQISTS
CCEECCCCCEEEEEEEECCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCEECCC
SKNPIAVSDELGKLNILAAREFNADQIGAELLRAPLAKGCVEAAINKGAVQDVLFFPSYL
CCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VPLSQMANTAQESKDQEPWLTKLYNLLSYKDLKEIKDDKGQSACVTDLSVKRVSVEQDCL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHCC
APPSDQFDKSSGFFNNYAEWYNKSHSKQIHVVEVPQFYTIQVVFSSKDYIGAEVALADLP
CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEHHHCC
KGINIQGSETEGHGVLPTSTVKEILYKYSTDGQVSQDEPMYVATFWLNSESVLSLSSQNT
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC
SLRINIDFSKKIDEDDTKQFATILDAKGIPKSYSLKENALALDIHTTAGVHPLLMAILSP
EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
LKKL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA