Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977061

Identifier: 156977061

GI number: 156977061

Start: 1030646

End: 1031185

Strand: Reverse

Name: 156977061

Synonym: VIBHAR_05846

Alternate gene names: NA

Gene position: 1031185-1030646 (Counterclockwise)

Preceding gene: 156977062

Following gene: 156977060

Centisome position: 46.79

GC content: 45.74

Gene sequence:

>540_bases
ATGGTAAAGCGTTTTGAGAAAACATCCGCCTTCAAGTATGGGCTCGCTCTTTGGGCCTTACTGAGTGCGACGTTGGCTTT
TGCTCAGTATGACGATGCGGATTTAAAAGCGGTGTACTTGTACCGCTTTGCATTGTTAGCCGATTGGATGAACACTGGTG
AACCTATCGCACCAATTGAATATTGTGTCTCTGAAAGTGACACTGTTTCGGAACATTTGAAACGTATTGTGGCTCGTAAG
CCAAAGTTATCTCGTTATTTTAATCTTTCCAGTGACGTGACGCCTAGTGCTTGTCACATTCTTTACGTACCCAATGCAAC
GCAAACTCAAATAGAAGCGCTAAAAGAGGCGTTCCCTCATTCTTTACTGATTGGTAATGGGGAAGAGTTTGTTTTTATGG
GCGGTATGGTGGCCTTTGTGAAGGTGAACAACCGTATTCGCCCTATGGTTTCGCGTGGCCATGTTGCACCTACCGGTGTT
CAACTTAGAGCGCAATTACTCAGTATTTCGATCCTAGCGGAAGACGAGGGGGAGCCATGA

Upstream 100 bases:

>100_bases
AGAATCTAGGAGCGAATCAAAGCAAAGAGTTTCCCAATAATTACAACTCTTTTGCCAATGGGACTCAGTACTGGCTGACC
TTAGATTGGAATTACGCCGG

Downstream 100 bases:

>100_bases
TTCGTTCTCGTCTTGCTCGCTTACCTCTGCGTCATAAGATGATGTTGCCGACTTGGTTAATGATCACGTTGATTGTTATT
GGCTTGGGGACTTTAGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MVKRFEKTSAFKYGLALWALLSATLAFAQYDDADLKAVYLYRFALLADWMNTGEPIAPIEYCVSESDTVSEHLKRIVARK
PKLSRYFNLSSDVTPSACHILYVPNATQTQIEALKEAFPHSLLIGNGEEFVFMGGMVAFVKVNNRIRPMVSRGHVAPTGV
QLRAQLLSISILAEDEGEP

Sequences:

>Translated_179_residues
MVKRFEKTSAFKYGLALWALLSATLAFAQYDDADLKAVYLYRFALLADWMNTGEPIAPIEYCVSESDTVSEHLKRIVARK
PKLSRYFNLSSDVTPSACHILYVPNATQTQIEALKEAFPHSLLIGNGEEFVFMGGMVAFVKVNNRIRPMVSRGHVAPTGV
QLRAQLLSISILAEDEGEP
>Mature_179_residues
MVKRFEKTSAFKYGLALWALLSATLAFAQYDDADLKAVYLYRFALLADWMNTGEPIAPIEYCVSESDTVSEHLKRIVARK
PKLSRYFNLSSDVTPSACHILYVPNATQTQIEALKEAFPHSLLIGNGEEFVFMGGMVAFVKVNNRIRPMVSRGHVAPTGV
QLRAQLLSISILAEDEGEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19927; Mature: 19927

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRFEKTSAFKYGLALWALLSATLAFAQYDDADLKAVYLYRFALLADWMNTGEPIAPIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
YCVSESDTVSEHLKRIVARKPKLSRYFNLSSDVTPSACHILYVPNATQTQIEALKEAFPH
HHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC
SLLIGNGEEFVFMGGMVAFVKVNNRIRPMVSRGHVAPTGVQLRAQLLSISILAEDEGEP
EEEEECCCCEEEECCEEEEEEECCCCCCHHHCCCCCCCCHHHHHHHHEEEEEECCCCCC
>Mature Secondary Structure
MVKRFEKTSAFKYGLALWALLSATLAFAQYDDADLKAVYLYRFALLADWMNTGEPIAPIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
YCVSESDTVSEHLKRIVARKPKLSRYFNLSSDVTPSACHILYVPNATQTQIEALKEAFPH
HHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC
SLLIGNGEEFVFMGGMVAFVKVNNRIRPMVSRGHVAPTGVQLRAQLLSISILAEDEGEP
EEEEECCCCEEEECCEEEEEEECCCCCCHHHCCCCCCCCHHHHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA