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The map label for this gene is cyoC [H]

Identifier: 156976718

GI number: 156976718

Start: 705442

End: 706041

Strand: Direct

Name: cyoC [H]

Synonym: VIBHAR_05493

Alternate gene names: 156976718

Gene position: 705442-706041 (Clockwise)

Preceding gene: 156976717

Following gene: 156976719

Centisome position: 32.01

GC content: 47.17

Gene sequence:

>600_bases
ATGCAAGCTAATGTAGCCGCTCACGAGCACGATCATCACCATGACTCGGCCGGCAACAAGTTGTTTGGTTTCTGGGTTTA
CCTAATGAGTGACTGTGTATTGTTTGCGACCTTGTTTGCAACCTACGCAGTACTTGAAAGTGGCTCTATCGCGGGCCCAA
CAGGTAAAGATATCTTTGAACTGCCGTTCGTATTTGTAGAAACCATGTTGCTACTGTTTAGTAGTATCACGTTTGGCTTC
GGCATGATTGCGATGAAGCGCAAAGATGTCGCAGGCCTAAAACGTTGGTTAAAAGTAACCTTCTTGCTTGGTCTTGGCTT
CATCTGCATGGAAGTGTATGAGTTCCATCACCTAATTGAAGAAGGTTACGGGCCGCAAGAAAGTGCGTTCCTGTCTGCGT
TCTTTACCTTGGTGGGCACTCACGGTCTGCACGTGACCTTTGGTTTGATCTGGCTGGCGGTGGGTTACCACCAGCTATCA
ACTAAGGGCCTTAACGACAACATGTCGATGCGATTCCAGTGTCTAAGCTTGTTCTGGCACTTCCTAGACATCGTTTGGAT
TTGCGTATTCACCATCGTTTACTTACTGGGGGTTATGTAA

Upstream 100 bases:

>100_bases
GAAATCAAAGCGATTGAAGCGGAGCGTCGAGCTCAACTTGAAGAAGCGAAGAAAAACGAAGTGAAAGACAACGAGAAAAA
AGACGATCTGGAGGTGACGT

Downstream 100 bases:

>100_bases
TGGAAAACCATCTAGATACCGGTGCTTCTGATTACGTAAAAGGCTTCATCGCGTCGCTGATCCTGACGGTGATTCCTTTC
TACTGTGTGTGGGCGCAACT

Product: cytochrome o ubiquinol oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III; Ubiquinol oxidase chain C [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQANVAAHEHDHHHDSAGNKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITFGF
GMIAMKRKDVAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTLVGTHGLHVTFGLIWLAVGYHQLS
TKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLGVM

Sequences:

>Translated_199_residues
MQANVAAHEHDHHHDSAGNKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITFGF
GMIAMKRKDVAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTLVGTHGLHVTFGLIWLAVGYHQLS
TKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLGVM
>Mature_199_residues
MQANVAAHEHDHHHDSAGNKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITFGF
GMIAMKRKDVAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTLVGTHGLHVTFGLIWLAVGYHQLS
TKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLGVM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=197, Percent_Identity=64.4670050761421, Blast_Score=265, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22509; Mature: 22509

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANVAAHEHDHHHDSAGNKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LPFVFVETMLLLFSSITFGFGMIAMKRKDVAGLKRWLKVTFLLGLGFICMEVYEFHHLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGYGPQESAFLSAFFTLVGTHGLHVTFGLIWLAVGYHQLSTKGLNDNMSMRFQCLSLFWH
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FLDIVWICVFTIVYLLGVM
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQANVAAHEHDHHHDSAGNKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LPFVFVETMLLLFSSITFGFGMIAMKRKDVAGLKRWLKVTFLLGLGFICMEVYEFHHLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGYGPQESAFLSAFFTLVGTHGLHVTFGLIWLAVGYHQLSTKGLNDNMSMRFQCLSLFWH
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FLDIVWICVFTIVYLLGVM
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]