| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976586
Identifier: 156976586
GI number: 156976586
Start: 589766
End: 590245
Strand: Direct
Name: 156976586
Synonym: VIBHAR_05360
Alternate gene names: NA
Gene position: 589766-590245 (Clockwise)
Preceding gene: 156976585
Following gene: 156976587
Centisome position: 26.76
GC content: 44.58
Gene sequence:
>480_bases ATGCCTTGGATTTACGTTAGAAAACTGCTTTTGTTGCTTCTTGCAATGGCTTTGTCGCCACTGCAGGCGTCGGCTGCACA AGTAGAACAGAAATCCTATTTGCCTCACTTCTCCAAGTTGCAGCCATTTACTGCAACCAGCTCTACATCAAGTTCACCTG TGGATTTTGCGGAATTCACAGAAGAAAGCACCCAGTCTCCAGTTTCTGAAAGCCATGCTTTCCAAGACTCTCTTGCTATC TTTAATTCTCAACGTTGGACATCGCACCTGCGTGAGAATATCGAAGACAAACACATTGACTTCATTGGCGATTTAAATGC GCCATTTTATGCTGATGCTGGCTACGCTTATAGCCTAATGGACATCAGTTGGCGTCAAAACCAATCTGTATTTAATCACT TCGTTAGCGACCATCGTCTTTCCGGCTGGAAAGAAACCAACGCCATGTACGTCGCGCTTAATAGTCAATTTTCTGCGTAG
Upstream 100 bases:
>100_bases CAGAGATTTATAACTTTTTAGTTGTTAAGTATAAGCAATAGGAATACTATCACCGAGCTGAGTTGAAGAACTCGGCTCGT TTTGTTTTAAGTGAGCTATC
Downstream 100 bases:
>100_bases GCACCATCACTCTGCACACCTTGTGCGTTCTTAACACGATAACTCTTCAACAGGGCCACTAAATCTCTGGGCATTCTGTA CCTGCATATCGTTCAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPWIYVRKLLLLLLAMALSPLQASAAQVEQKSYLPHFSKLQPFTATSSTSSSPVDFAEFTEESTQSPVSESHAFQDSLAI FNSQRWTSHLRENIEDKHIDFIGDLNAPFYADAGYAYSLMDISWRQNQSVFNHFVSDHRLSGWKETNAMYVALNSQFSA
Sequences:
>Translated_159_residues MPWIYVRKLLLLLLAMALSPLQASAAQVEQKSYLPHFSKLQPFTATSSTSSSPVDFAEFTEESTQSPVSESHAFQDSLAI FNSQRWTSHLRENIEDKHIDFIGDLNAPFYADAGYAYSLMDISWRQNQSVFNHFVSDHRLSGWKETNAMYVALNSQFSA >Mature_158_residues PWIYVRKLLLLLLAMALSPLQASAAQVEQKSYLPHFSKLQPFTATSSTSSSPVDFAEFTEESTQSPVSESHAFQDSLAIF NSQRWTSHLRENIEDKHIDFIGDLNAPFYADAGYAYSLMDISWRQNQSVFNHFVSDHRLSGWKETNAMYVALNSQFSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18046; Mature: 17915
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWIYVRKLLLLLLAMALSPLQASAAQVEQKSYLPHFSKLQPFTATSSTSSSPVDFAEFT CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHH EESTQSPVSESHAFQDSLAIFNSQRWTSHLRENIEDKHIDFIGDLNAPFYADAGYAYSLM HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHEECCCCCEEECCCCEEEEE DISWRQNQSVFNHFVSDHRLSGWKETNAMYVALNSQFSA ECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure PWIYVRKLLLLLLAMALSPLQASAAQVEQKSYLPHFSKLQPFTATSSTSSSPVDFAEFT CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHH EESTQSPVSESHAFQDSLAIFNSQRWTSHLRENIEDKHIDFIGDLNAPFYADAGYAYSLM HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHEECCCCCEEECCCCEEEEE DISWRQNQSVFNHFVSDHRLSGWKETNAMYVALNSQFSA ECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA