Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976585

Identifier: 156976585

GI number: 156976585

Start: 588953

End: 589621

Strand: Direct

Name: 156976585

Synonym: VIBHAR_05359

Alternate gene names: NA

Gene position: 588953-589621 (Clockwise)

Preceding gene: 156976583

Following gene: 156976586

Centisome position: 26.72

GC content: 43.8

Gene sequence:

>669_bases
ATGAAGAAGGCCCTGATAGCACTGGTTATTCTGCTCTTATTTGGTGGGGCTGGAGCTGGGTATTACTTTTTCTTTATGCA
GAAAGAAGAGCCCGTTGCTGAACAAGAGCAAGAACCAGAAAAGCCGAATGAGCCAGCAGAGAAGCCGAAACCAATCATGG
ACCTAGAGGCTCCTGCACCCGAGATCACGGAATACTACGTAATAGAGCGACGTATTGATGTTTATAACAAGCCTGAGCAC
CAAGCGTTAGTCGTTGACTCATTGTACAAAGGAGAGAAGGTCTCTGTACTGGAAAAGGTCGATGGCTGGTTTCGACTATC
GGATTATATTGTGTATGAAGAGGGTGGGGAAGAAACAGCAGAATGGGTCGATTCAAAAGGGTTATCTGATGCTGAGCCTG
TTATCAAAGAACATGAGCGTTTAGAAATTCTAGATGGTTACTTACAAAAATCAGACGATTTAAAAACGCACCTCGATATG
TTTCGAAACAAAACCCAGCAGTTACTGGATGACGAGACATGTGACCCAAGTGATTTTGAAGAATTGGGCGGCTGGGTTCG
CTCAGTGACATACAAGACGCGTAATGTGTACTTCATCTATTGTGGCGGGCTAGAGCAAGAAAACAAAATCTATTTGGATG
TCGATAAAGGCGAAATATTTTACCGATGA

Upstream 100 bases:

>100_bases
GTTAGTTGACGCATCTGTTATGCACCTTCTGTCATTATAGTTACTATGGCGATACTTATTGCTTAAGTAATGCTGTGTAA
GGAACAAAAAGGAATAGAAC

Downstream 100 bases:

>100_bases
ATATCGCGTCAGCCCCTATGGCAATTGCTTTCCATGGTTGAAAACAGAGATTTATAACTTTTTAGTTGTTAAGTATAAGC
AATAGGAATACTATCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: SH3 Domain-Containing Protein

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKALIALVILLLFGGAGAGYYFFFMQKEEPVAEQEQEPEKPNEPAEKPKPIMDLEAPAPEITEYYVIERRIDVYNKPEH
QALVVDSLYKGEKVSVLEKVDGWFRLSDYIVYEEGGEETAEWVDSKGLSDAEPVIKEHERLEILDGYLQKSDDLKTHLDM
FRNKTQQLLDDETCDPSDFEELGGWVRSVTYKTRNVYFIYCGGLEQENKIYLDVDKGEIFYR

Sequences:

>Translated_222_residues
MKKALIALVILLLFGGAGAGYYFFFMQKEEPVAEQEQEPEKPNEPAEKPKPIMDLEAPAPEITEYYVIERRIDVYNKPEH
QALVVDSLYKGEKVSVLEKVDGWFRLSDYIVYEEGGEETAEWVDSKGLSDAEPVIKEHERLEILDGYLQKSDDLKTHLDM
FRNKTQQLLDDETCDPSDFEELGGWVRSVTYKTRNVYFIYCGGLEQENKIYLDVDKGEIFYR
>Mature_222_residues
MKKALIALVILLLFGGAGAGYYFFFMQKEEPVAEQEQEPEKPNEPAEKPKPIMDLEAPAPEITEYYVIERRIDVYNKPEH
QALVVDSLYKGEKVSVLEKVDGWFRLSDYIVYEEGGEETAEWVDSKGLSDAEPVIKEHERLEILDGYLQKSDDLKTHLDM
FRNKTQQLLDDETCDPSDFEELGGWVRSVTYKTRNVYFIYCGGLEQENKIYLDVDKGEIFYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25741; Mature: 25741

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALIALVILLLFGGAGAGYYFFFMQKEEPVAEQEQEPEKPNEPAEKPKPIMDLEAPAP
CHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCC
EITEYYVIERRIDVYNKPEHQALVVDSLYKGEKVSVLEKVDGWFRLSDYIVYEEGGEETA
HHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCHHHHHHHHCCEEEEEEEEEEECCCCHHH
EWVDSKGLSDAEPVIKEHERLEILDGYLQKSDDLKTHLDMFRNKTQQLLDDETCDPSDFE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
ELGGWVRSVTYKTRNVYFIYCGGLEQENKIYLDVDKGEIFYR
HHHHHHHHHEEEECEEEEEEECCCCCCCEEEEEECCCCEEEC
>Mature Secondary Structure
MKKALIALVILLLFGGAGAGYYFFFMQKEEPVAEQEQEPEKPNEPAEKPKPIMDLEAPAP
CHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCC
EITEYYVIERRIDVYNKPEHQALVVDSLYKGEKVSVLEKVDGWFRLSDYIVYEEGGEETA
HHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCHHHHHHHHCCEEEEEEEEEEECCCCHHH
EWVDSKGLSDAEPVIKEHERLEILDGYLQKSDDLKTHLDMFRNKTQQLLDDETCDPSDFE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
ELGGWVRSVTYKTRNVYFIYCGGLEQENKIYLDVDKGEIFYR
HHHHHHHHHEEEECEEEEEEECCCCCCCEEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA