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The map label for this gene is lrp [C]

Identifier: 156976562

GI number: 156976562

Start: 569374

End: 569829

Strand: Direct

Name: lrp [C]

Synonym: VIBHAR_05336

Alternate gene names: 156976562

Gene position: 569374-569829 (Clockwise)

Preceding gene: 156976560

Following gene: 156976563

Centisome position: 25.83

GC content: 41.45

Gene sequence:

>456_bases
ATGGACAAATTTGATCATCAGATCATAGACCTATTGCGGCAGAATGCCCGCCTCTCTATTACAGAGATTTCAGAGCAAGT
CAGTTTGTCACGCTCAGCGGTGACAGCGCGAATAAAAAAGCTAGAAAATGATCGAGTGATTCTTGGCTATCATGCCGATA
TTGCAACATCTCAAGAGTCGACGCTTTGTGCTTATATGGTGTTGAAATTTGACACGTCAGCAGCAAGTCACCACTGCGAT
AATTACGCCAAAGATCTTTACAAAATAGACGGTGTTAAATGGTGTCATGCAATTAGTGGTGAAACCGATATGATGCTGTT
TGTTGAAGTACCGAATATCGCCCGTTTGAATGAGATTCGAGACTATATCCAAAGTTATCCAGAGCTTCGAAATGTGATGA
CACATACCGTGTTAACGGAGTTTTTCAATACCACAGGGAGCAAGTTTGTAAAATGA

Upstream 100 bases:

>100_bases
TCAAAATGACGGTAGTTATTGTCAATAAAGCTCATATTGTCTATTTCCAATAAGTTGGAATTGAGTAGAATGACGAGACG
AAGAAAAGCGTGGTGATGTT

Downstream 100 bases:

>100_bases
CCGAGAAAGACATCGTCCTCAATTTCTGGAACGTAATGGCAAGCAATGATTTCTATGCGGCAGCAGAGTGTCTTTCGCCT
GATTGTGAAGTAATTTGGCC

Product: transcriptional regulators Psort location

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AsnC Family; Leucine-Responsive Regulatory Protein; Proline Dehydrogenase Transcriptional Activator; Transcriptional Regulator AsnC Family Protein; Branched Chain Amino Acid ABC Transporter; Transcriptional Regulators~Psort Location; Leucin Responsive Regulatory Protein; Transcriptional Regulator AsnC/Lrp Family; Helix-Turn-Helix Domain-Containing Protein; AsnC/Lrp Family Transcriptional Regulator; Transcriptional Regulatory Protein Asnc Family; Transcription Regulator Protein; Transcriptional Regulator Protein AsnC Family; AsnC-Type Transcriptional Regulator; AsnC Family Transcriptional Regulatory Protein

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDKFDHQIIDLLRQNARLSITEISEQVSLSRSAVTARIKKLENDRVILGYHADIATSQESTLCAYMVLKFDTSAASHHCD
NYAKDLYKIDGVKWCHAISGETDMMLFVEVPNIARLNEIRDYIQSYPELRNVMTHTVLTEFFNTTGSKFVK

Sequences:

>Translated_151_residues
MDKFDHQIIDLLRQNARLSITEISEQVSLSRSAVTARIKKLENDRVILGYHADIATSQESTLCAYMVLKFDTSAASHHCD
NYAKDLYKIDGVKWCHAISGETDMMLFVEVPNIARLNEIRDYIQSYPELRNVMTHTVLTEFFNTTGSKFVK
>Mature_151_residues
MDKFDHQIIDLLRQNARLSITEISEQVSLSRSAVTARIKKLENDRVILGYHADIATSQESTLCAYMVLKFDTSAASHHCD
NYAKDLYKIDGVKWCHAISGETDMMLFVEVPNIARLNEIRDYIQSYPELRNVMTHTVLTEFFNTTGSKFVK

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17307; Mature: 17307

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFDHQIIDLLRQNARLSITEISEQVSLSRSAVTARIKKLENDRVILGYHADIATSQES
CCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
TLCAYMVLKFDTSAASHHCDNYAKDLYKIDGVKWCHAISGETDMMLFVEVPNIARLNEIR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCHHHHHHH
DYIQSYPELRNVMTHTVLTEFFNTTGSKFVK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MDKFDHQIIDLLRQNARLSITEISEQVSLSRSAVTARIKKLENDRVILGYHADIATSQES
CCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
TLCAYMVLKFDTSAASHHCDNYAKDLYKIDGVKWCHAISGETDMMLFVEVPNIARLNEIR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCHHHHHHH
DYIQSYPELRNVMTHTVLTEFFNTTGSKFVK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA