| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976563
Identifier: 156976563
GI number: 156976563
Start: 569826
End: 570203
Strand: Direct
Name: 156976563
Synonym: VIBHAR_05337
Alternate gene names: NA
Gene position: 569826-570203 (Clockwise)
Preceding gene: 156976562
Following gene: 156976564
Centisome position: 25.85
GC content: 46.3
Gene sequence:
>378_bases ATGACCGAGAAAGACATCGTCCTCAATTTCTGGAACGTAATGGCAAGCAATGATTTCTATGCGGCAGCAGAGTGTCTTTC GCCTGATTGTGAAGTAATTTGGCCATTGACCAAAGAAGTCATTCGCGGCAGAAAGAACTTTGCCGAACTGAACTCAGCTT ATCCAGCAGAGGGTAAGTGGACCTTTGCGATTGAACGTATTGTGGGAGAAGGCGATCAAGTAGTCACCGATGTGATTGTT AGTGATGGCGTTCGCTCAGATAGAGTGATTACTTTTCACAGCATCCGTGATGGGCTAATTTGCAAACAAGTGGAATATTG GCCGGAAGATTACGCCGCCGCAGATTGGCGCACACAATGGGTTGAATGTGCTGAATAA
Upstream 100 bases:
>100_bases AGATTCGAGACTATATCCAAAGTTATCCAGAGCTTCGAAATGTGATGACACATACCGTGTTAACGGAGTTTTTCAATACC ACAGGGAGCAAGTTTGTAAA
Downstream 100 bases:
>100_bases CATCAACTTGAATCTGCTGCGCTCTTTGCATGTATTGCTTGAAGAGTGCCATGTGAGCAGAACCGCGGAGCGTTTGCACA TCACTCAATCCGCGGTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTEKDIVLNFWNVMASNDFYAAAECLSPDCEVIWPLTKEVIRGRKNFAELNSAYPAEGKWTFAIERIVGEGDQVVTDVIV SDGVRSDRVITFHSIRDGLICKQVEYWPEDYAAADWRTQWVECAE
Sequences:
>Translated_125_residues MTEKDIVLNFWNVMASNDFYAAAECLSPDCEVIWPLTKEVIRGRKNFAELNSAYPAEGKWTFAIERIVGEGDQVVTDVIV SDGVRSDRVITFHSIRDGLICKQVEYWPEDYAAADWRTQWVECAE >Mature_124_residues TEKDIVLNFWNVMASNDFYAAAECLSPDCEVIWPLTKEVIRGRKNFAELNSAYPAEGKWTFAIERIVGEGDQVVTDVIVS DGVRSDRVITFHSIRDGLICKQVEYWPEDYAAADWRTQWVECAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14311; Mature: 14180
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS01295 ISPD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKDIVLNFWNVMASNDFYAAAECLSPDCEVIWPLTKEVIRGRKNFAELNSAYPAEGKW CCCCHHEEHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHCCHHHHHHHCCCCCCCCC TFAIERIVGEGDQVVTDVIVSDGVRSDRVITFHSIRDGLICKQVEYWPEDYAAADWRTQW CEEEEHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHH VECAE HCCCC >Mature Secondary Structure TEKDIVLNFWNVMASNDFYAAAECLSPDCEVIWPLTKEVIRGRKNFAELNSAYPAEGKW CCCHHEEHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHCCHHHHHHHCCCCCCCCC TFAIERIVGEGDQVVTDVIVSDGVRSDRVITFHSIRDGLICKQVEYWPEDYAAADWRTQW CEEEEHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHH VECAE HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA