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The map label for this gene is mocR [H]

Identifier: 156976560

GI number: 156976560

Start: 566509

End: 567921

Strand: Direct

Name: mocR [H]

Synonym: VIBHAR_05334

Alternate gene names: 156976560

Gene position: 566509-567921 (Clockwise)

Preceding gene: 156976558

Following gene: 156976562

Centisome position: 25.7

GC content: 46.14

Gene sequence:

>1413_bases
TTGATTGATATCGGTGACCTGCATTTAAAAGAAAGTGATGGAACGCGTCAGCAAGCGTTGTTTTTTGCTATCCGCGAGAA
GATTGTTCAAGGGCTGTGGGCGAAGAATGGGAAATTGCCGTCTACACGAAAGCTATCACAAGACCTTGAACTCAGTAGGA
ATACCGTGATTGCAGCCTACGAGCAGTTAGTGGCGGAAGGGTACTTGAACAGTCAAAAAGGCTCTGGCTTTTATGTTGCT
GTAGAACTGCCGGAACAGTATCTGCCTGAACCCAGTTCAATCAAAACGGACTCATCACTGAAAACCAACTTTGACATCAA
CCGCGCATTTGCTCCGGGTGTGCCTGATTTAGAAGCTTTTCCTATGGCGCAGTGGCAAAAGTTACTTGCTCGTCATCTTT
CCCGTACCTGTTTGCTAGGGAACCAAGATATTCAGGGCAGTTGGGCATTGCGTTGTGCTTTAGCTGACTACCTTGCATCA
AGCCGTTCAGTAAATTGCTCCCCAGAGCGCATCATTATTACTTCTGGGGCACAGCAAGCGTTGTCAATTGCGACGATGGT
AGCTCTAAAACAAGGTGATAAGGTTTTGATGGAGCAACCGGGTTACGCGCAAATGCGGAAGCTAATTCAGTTCCAGCAAT
ATCAATTTGAGCCCCTATTGGTACGAGAAAAACTCGGCTTTGATGTGGAAGCGGTAACCAGCAGCGATGCCGATGCTCTA
TATATCACACCAAGCAATCAGTATCCGATGGGAACTACGCTTAATACCGAGCAGCGAGGGAAGATTATCAACTGGGCGGT
CGAGCAATCACGTTGGGTTATCGAAGACGATTACGACAGTGAATTTCAGTTTGCCCATCGTCCATATACCAGCTTACAAG
GGCTAGCGGCTCAAATGGGGCGAGATAATCGCGTACTGTATGTGGGCTCGTTCAGTAAAGTGATGTTTAATGGAATACGC
CTTGGCTATCTTGTGGTACCTGAACGTATAGTTGAGCAATGCTTGGTGGTTAAGGATGCGTTAACCGGTGATTCGCCAAC
GCACACCCAAGAGGCGTTGGCTGATTTTATTACTGAAGGTGGGTTAATTCGTCATATCCGCAAAATGCGCCGACTTTACA
AAACTAAGCATGAGCAGATGTGTTTGGCTGTTGAAAAGCACTTTGGCGATAGAGTTAAGGTGATCAGTCAGGCTGCTGGT
CTCCATATCACTTTAAAGTGGTTGCAAGGGGTTGATGAGCATGAATGGACGCAACGAGCTAAATCCAAAGGGATAGTGTT
GCGTCCATTGAGTTTTTATGAACATTCAGATTTTAAAGCGCGAAATTGGCAAGGAGCGGTATTGGGTTATGGCAATGTCG
CATTAAGTGAGATTGATGCTCTGGTTGAACAGCTTTCTGAGTTGTTTGAATAA

Upstream 100 bases:

>100_bases
AGGGACGAGCACTTGCTTCTCAACCTTTGATTGCAATGTACCGTTTAACTGGTAGCTTAAAGAGAGCCAGTTTTAACTAA
CGGATGGATCCAGTTTGTCT

Downstream 100 bases:

>100_bases
CTACGCTAAGCCTTAATCAGTCACTCGGCGAGTGTTCTTTTTTCGCCACTGTTTCCATGGTAGGGAGAGCACTGCAAAAA
TAGTAACGGCGTACAGCATA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MIDIGDLHLKESDGTRQQALFFAIREKIVQGLWAKNGKLPSTRKLSQDLELSRNTVIAAYEQLVAEGYLNSQKGSGFYVA
VELPEQYLPEPSSIKTDSSLKTNFDINRAFAPGVPDLEAFPMAQWQKLLARHLSRTCLLGNQDIQGSWALRCALADYLAS
SRSVNCSPERIIITSGAQQALSIATMVALKQGDKVLMEQPGYAQMRKLIQFQQYQFEPLLVREKLGFDVEAVTSSDADAL
YITPSNQYPMGTTLNTEQRGKIINWAVEQSRWVIEDDYDSEFQFAHRPYTSLQGLAAQMGRDNRVLYVGSFSKVMFNGIR
LGYLVVPERIVEQCLVVKDALTGDSPTHTQEALADFITEGGLIRHIRKMRRLYKTKHEQMCLAVEKHFGDRVKVISQAAG
LHITLKWLQGVDEHEWTQRAKSKGIVLRPLSFYEHSDFKARNWQGAVLGYGNVALSEIDALVEQLSELFE

Sequences:

>Translated_470_residues
MIDIGDLHLKESDGTRQQALFFAIREKIVQGLWAKNGKLPSTRKLSQDLELSRNTVIAAYEQLVAEGYLNSQKGSGFYVA
VELPEQYLPEPSSIKTDSSLKTNFDINRAFAPGVPDLEAFPMAQWQKLLARHLSRTCLLGNQDIQGSWALRCALADYLAS
SRSVNCSPERIIITSGAQQALSIATMVALKQGDKVLMEQPGYAQMRKLIQFQQYQFEPLLVREKLGFDVEAVTSSDADAL
YITPSNQYPMGTTLNTEQRGKIINWAVEQSRWVIEDDYDSEFQFAHRPYTSLQGLAAQMGRDNRVLYVGSFSKVMFNGIR
LGYLVVPERIVEQCLVVKDALTGDSPTHTQEALADFITEGGLIRHIRKMRRLYKTKHEQMCLAVEKHFGDRVKVISQAAG
LHITLKWLQGVDEHEWTQRAKSKGIVLRPLSFYEHSDFKARNWQGAVLGYGNVALSEIDALVEQLSELFE
>Mature_470_residues
MIDIGDLHLKESDGTRQQALFFAIREKIVQGLWAKNGKLPSTRKLSQDLELSRNTVIAAYEQLVAEGYLNSQKGSGFYVA
VELPEQYLPEPSSIKTDSSLKTNFDINRAFAPGVPDLEAFPMAQWQKLLARHLSRTCLLGNQDIQGSWALRCALADYLAS
SRSVNCSPERIIITSGAQQALSIATMVALKQGDKVLMEQPGYAQMRKLIQFQQYQFEPLLVREKLGFDVEAVTSSDADAL
YITPSNQYPMGTTLNTEQRGKIINWAVEQSRWVIEDDYDSEFQFAHRPYTSLQGLAAQMGRDNRVLYVGSFSKVMFNGIR
LGYLVVPERIVEQCLVVKDALTGDSPTHTQEALADFITEGGLIRHIRKMRRLYKTKHEQMCLAVEKHFGDRVKVISQAAG
LHITLKWLQGVDEHEWTQRAKSKGIVLRPLSFYEHSDFKARNWQGAVLGYGNVALSEIDALVEQLSELFE

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790797, Length=421, Percent_Identity=27.5534441805226, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1787710, Length=457, Percent_Identity=25.164113785558, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 52999; Mature: 52999

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIGDLHLKESDGTRQQALFFAIREKIVQGLWAKNGKLPSTRKLSQDLELSRNTVIAAY
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH
EQLVAEGYLNSQKGSGFYVAVELPEQYLPEPSSIKTDSSLKTNFDINRAFAPGVPDLEAF
HHHHHHHCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PMAQWQKLLARHLSRTCLLGNQDIQGSWALRCALADYLASSRSVNCSPERIIITSGAQQA
CHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH
LSIATMVALKQGDKVLMEQPGYAQMRKLIQFQQYQFEPLLVREKLGFDVEAVTSSDADAL
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEEEECCCCCCEE
YITPSNQYPMGTTLNTEQRGKIINWAVEQSRWVIEDDYDSEFQFAHRPYTSLQGLAAQMG
EEECCCCCCCCCCCCCHHCCCEEEEEECCCCEEEECCCCCCHHECCCCHHHHHHHHHHHC
RDNRVLYVGSFSKVMFNGIRLGYLVVPERIVEQCLVVKDALTGDSPTHTQEALADFITEG
CCCCEEEEECHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
GLIRHIRKMRRLYKTKHEQMCLAVEKHFGDRVKVISQAAGLHITLKWLQGVDEHEWTQRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHH
KSKGIVLRPLSFYEHSDFKARNWQGAVLGYGNVALSEIDALVEQLSELFE
HCCCEEEEEHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDIGDLHLKESDGTRQQALFFAIREKIVQGLWAKNGKLPSTRKLSQDLELSRNTVIAAY
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH
EQLVAEGYLNSQKGSGFYVAVELPEQYLPEPSSIKTDSSLKTNFDINRAFAPGVPDLEAF
HHHHHHHCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PMAQWQKLLARHLSRTCLLGNQDIQGSWALRCALADYLASSRSVNCSPERIIITSGAQQA
CHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH
LSIATMVALKQGDKVLMEQPGYAQMRKLIQFQQYQFEPLLVREKLGFDVEAVTSSDADAL
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEEEECCCCCCEE
YITPSNQYPMGTTLNTEQRGKIINWAVEQSRWVIEDDYDSEFQFAHRPYTSLQGLAAQMG
EEECCCCCCCCCCCCCHHCCCEEEEEECCCCEEEECCCCCCHHECCCCHHHHHHHHHHHC
RDNRVLYVGSFSKVMFNGIRLGYLVVPERIVEQCLVVKDALTGDSPTHTQEALADFITEG
CCCCEEEEECHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
GLIRHIRKMRRLYKTKHEQMCLAVEKHFGDRVKVISQAAGLHITLKWLQGVDEHEWTQRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHH
KSKGIVLRPLSFYEHSDFKARNWQGAVLGYGNVALSEIDALVEQLSELFE
HCCCEEEEEHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]