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The map label for this gene is yiaV [H]

Identifier: 156976551

GI number: 156976551

Start: 558408

End: 559610

Strand: Reverse

Name: yiaV [H]

Synonym: VIBHAR_05325

Alternate gene names: 156976551

Gene position: 559610-558408 (Counterclockwise)

Preceding gene: 156976552

Following gene: 156976550

Centisome position: 25.39

GC content: 46.55

Gene sequence:

>1203_bases
ATGTTAGAAGGTTTAGCGGTATGGGCACTCTTCATCTATCTGCTCCGTTTAGTCGGCATGCCTTGGAACAAAGCAACCAA
ATCGTTCGCTTACCTAGGCGGCTTGGGGTGGTTAATGTTCGTCTGGGTAGGCCTCATCAACTTCACGCCGATGGATCTAT
CCGGCGGCTCAGTGGTGCAGTCACCACACATCCAGTTGCGTCCGGATTCAACCAATGTGAAAGGCAAAGTTGACCATATT
TATATCAAGCCAAATCAACAAATTGAAAAAGGTCAGCTCATTTACGAACTCGACCCAACGCAATATGAGATCGCATTGAA
CCAAGCAAATGTGTCGGCAGATTCTGCTCGAGTAGCACTGGCAACAGCACAAGGTGATATCGAGATTGAAGAAGCAAACC
ATCAAGCACTGGTGCAAGATCTAGAAACGTCAAAAAGCCAATTGGAAGCGGCGAAAGTTGACTATAAATTGCAGAAAAAG
ATGCTGAATCGTTACGTTGAACAAAACCAAGTAGTCCAAAACACCATTACGGCAAGCGACATCGACAAACAATCGAGTGC
CGTTGATATAGCACGCCACAACGTGTTAACTCTTGAATCTCAAATCAAGAAGAAACAAGTCGATATCTCACGTGCAAAAC
TGGCGATTCATAAAGCTGAGCTCGCGGTTGAAACCAAACAGGCTGAACTGCGCCAAGCGGAAGAGCAAATCGCAAAAGCA
CAATGGGATTTGAACAGCACCAAAGTGCACGCACCAGCAGATGGCTTTGTAACCAACTTTATCCTGCGTGAAGGCCAGCG
TGTATCGATGATGCCGCGTATCAACATGTACACTAACGAGAAGTACGTTCTGATGCGAGTGAACCACCAAGCAATTCGTA
ATATCAAACCAGGTCAACCTGCTGAATTTTCTTCTTCGGTTTACCCTGGCAAGATCTTCTCTGCAACAGTAGAGGGCATT
GTTGAAGCGACCGGCGAATCACAAGGCAACCTACTTGGTCTGGATGATTCCGTTCGCGCTACAACCGGTAAGAACTTGCA
GAACAAAATTGATGAGCCAGAAGGCTACGATATCCCTGTCGGCTCAGTTGGTCTAGCATGGGTCAGCGGCGAGAAACCAA
TTGGTTTCCTAGCGTTCTTGGATGTGATTCGTGGCATCATCATCCGAATGAAGTCGCAACTGTACTTCTTCTACTCTATC
TAA

Upstream 100 bases:

>100_bases
TGATCTTTGCATTCGTTGATATGGAAAAAGCCATCATCAATCTGCGTGATACATGGAAAAGTAAACCGCAAACAGAAACA
CAGCCAGAAGAGGAGGCATA

Downstream 100 bases:

>100_bases
ACTCCCAAACCGCCAGTTCCGCTGGCGGTTTTCTTTTCATTTGTATCCAAGCACGTAGTTTTCCCGTATAACAAATAGTT
AGTAAATAACGGAGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLEGLAVWALFIYLLRLVGMPWNKATKSFAYLGGLGWLMFVWVGLINFTPMDLSGGSVVQSPHIQLRPDSTNVKGKVDHI
YIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVALATAQGDIEIEEANHQALVQDLETSKSQLEAAKVDYKLQKK
MLNRYVEQNQVVQNTITASDIDKQSSAVDIARHNVLTLESQIKKKQVDISRAKLAIHKAELAVETKQAELRQAEEQIAKA
QWDLNSTKVHAPADGFVTNFILREGQRVSMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAEFSSSVYPGKIFSATVEGI
VEATGESQGNLLGLDDSVRATTGKNLQNKIDEPEGYDIPVGSVGLAWVSGEKPIGFLAFLDVIRGIIIRMKSQLYFFYSI

Sequences:

>Translated_400_residues
MLEGLAVWALFIYLLRLVGMPWNKATKSFAYLGGLGWLMFVWVGLINFTPMDLSGGSVVQSPHIQLRPDSTNVKGKVDHI
YIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVALATAQGDIEIEEANHQALVQDLETSKSQLEAAKVDYKLQKK
MLNRYVEQNQVVQNTITASDIDKQSSAVDIARHNVLTLESQIKKKQVDISRAKLAIHKAELAVETKQAELRQAEEQIAKA
QWDLNSTKVHAPADGFVTNFILREGQRVSMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAEFSSSVYPGKIFSATVEGI
VEATGESQGNLLGLDDSVRATTGKNLQNKIDEPEGYDIPVGSVGLAWVSGEKPIGFLAFLDVIRGIIIRMKSQLYFFYSI
>Mature_400_residues
MLEGLAVWALFIYLLRLVGMPWNKATKSFAYLGGLGWLMFVWVGLINFTPMDLSGGSVVQSPHIQLRPDSTNVKGKVDHI
YIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVALATAQGDIEIEEANHQALVQDLETSKSQLEAAKVDYKLQKK
MLNRYVEQNQVVQNTITASDIDKQSSAVDIARHNVLTLESQIKKKQVDISRAKLAIHKAELAVETKQAELRQAEEQIAKA
QWDLNSTKVHAPADGFVTNFILREGQRVSMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAEFSSSVYPGKIFSATVEGI
VEATGESQGNLLGLDDSVRATTGKNLQNKIDEPEGYDIPVGSVGLAWVSGEKPIGFLAFLDVIRGIIIRMKSQLYFFYSI

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790012, Length=400, Percent_Identity=25.5, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1790024, Length=408, Percent_Identity=24.2647058823529, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 44564; Mature: 44564

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGLAVWALFIYLLRLVGMPWNKATKSFAYLGGLGWLMFVWVGLINFTPMDLSGGSVVQ
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
SPHIQLRPDSTNVKGKVDHIYIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVAL
CCCEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEE
ATAQGDIEIEEANHQALVQDLETSKSQLEAAKVDYKLQKKMLNRYVEQNQVVQNTITASD
EECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IDKQSSAVDIARHNVLTLESQIKKKQVDISRAKLAIHKAELAVETKQAELRQAEEQIAKA
CCCCCCHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWDLNSTKVHAPADGFVTNFILREGQRVSMMPRINMYTNEKYVLMRVNHQAIRNIKPGQP
HCCCCCCEEECCCCHHHHHHHHHCCCCEEECCCEEEEECCEEEEEEECHHHHHCCCCCCC
AEFSSSVYPGKIFSATVEGIVEATGESQGNLLGLDDSVRATTGKNLQNKIDEPEGYDIPV
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCC
GSVGLAWVSGEKPIGFLAFLDVIRGIIIRMKSQLYFFYSI
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEC
>Mature Secondary Structure
MLEGLAVWALFIYLLRLVGMPWNKATKSFAYLGGLGWLMFVWVGLINFTPMDLSGGSVVQ
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
SPHIQLRPDSTNVKGKVDHIYIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVAL
CCCEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEE
ATAQGDIEIEEANHQALVQDLETSKSQLEAAKVDYKLQKKMLNRYVEQNQVVQNTITASD
EECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IDKQSSAVDIARHNVLTLESQIKKKQVDISRAKLAIHKAELAVETKQAELRQAEEQIAKA
CCCCCCHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWDLNSTKVHAPADGFVTNFILREGQRVSMMPRINMYTNEKYVLMRVNHQAIRNIKPGQP
HCCCCCCEEECCCCHHHHHHHHHCCCCEEECCCEEEEECCEEEEEEECHHHHHCCCCCCC
AEFSSSVYPGKIFSATVEGIVEATGESQGNLLGLDDSVRATTGKNLQNKIDEPEGYDIPV
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCC
GSVGLAWVSGEKPIGFLAFLDVIRGIIIRMKSQLYFFYSI
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]