Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976552

Identifier: 156976552

GI number: 156976552

Start: 559610

End: 559936

Strand: Reverse

Name: 156976552

Synonym: VIBHAR_05326

Alternate gene names: NA

Gene position: 559936-559610 (Counterclockwise)

Preceding gene: 156976554

Following gene: 156976551

Centisome position: 25.41

GC content: 48.01

Gene sequence:

>327_bases
ATGAGTTTACTGAGTGTCCCATTTGCCGGAACAGGCGCAGATACAGCGTTACATGTTGTCGCTGCCGTCGTTTTAATCGC
GAGTGTCGCAGGCGCGTGTTACGGCTTTTGGAAAATCCATGAGTTGCCAATTAATAAGGCGCACAGCAAAGACCATCATC
AGATAGGGCTCATTACCGCCCTCACCTGGATAGGATTTGTCTGGCACTGGGTATGGGTGCTAGCCGTGATCTTTGCATTC
GTTGATATGGAAAAAGCCATCATCAATCTGCGTGATACATGGAAAAGTAAACCGCAAACAGAAACACAGCCAGAAGAGGA
GGCATAA

Upstream 100 bases:

>100_bases
CACATCAAATTTAATCTTCTAGTGATTGAATTTGTCACAAACCCTCACCTATTTCAATTCCAGACCACAATACGCCAACA
GTTTGATAGAGGAGTGTTTA

Downstream 100 bases:

>100_bases
TGTTAGAAGGTTTAGCGGTATGGGCACTCTTCATCTATCTGCTCCGTTTAGTCGGCATGCCTTGGAACAAAGCAACCAAA
TCGTTCGCTTACCTAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease Facilitator Superfamily

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITALTWIGFVWHWVWVLAVIFAF
VDMEKAIINLRDTWKSKPQTETQPEEEA

Sequences:

>Translated_108_residues
MSLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITALTWIGFVWHWVWVLAVIFAF
VDMEKAIINLRDTWKSKPQTETQPEEEA
>Mature_107_residues
SLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITALTWIGFVWHWVWVLAVIFAFV
DMEKAIINLRDTWKSKPQTETQPEEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11992; Mature: 11861

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LTWIGFVWHWVWVLAVIFAFVDMEKAIINLRDTWKSKPQTETQPEEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LTWIGFVWHWVWVLAVIFAFVDMEKAIINLRDTWKSKPQTETQPEEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA