| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976552
Identifier: 156976552
GI number: 156976552
Start: 559610
End: 559936
Strand: Reverse
Name: 156976552
Synonym: VIBHAR_05326
Alternate gene names: NA
Gene position: 559936-559610 (Counterclockwise)
Preceding gene: 156976554
Following gene: 156976551
Centisome position: 25.41
GC content: 48.01
Gene sequence:
>327_bases ATGAGTTTACTGAGTGTCCCATTTGCCGGAACAGGCGCAGATACAGCGTTACATGTTGTCGCTGCCGTCGTTTTAATCGC GAGTGTCGCAGGCGCGTGTTACGGCTTTTGGAAAATCCATGAGTTGCCAATTAATAAGGCGCACAGCAAAGACCATCATC AGATAGGGCTCATTACCGCCCTCACCTGGATAGGATTTGTCTGGCACTGGGTATGGGTGCTAGCCGTGATCTTTGCATTC GTTGATATGGAAAAAGCCATCATCAATCTGCGTGATACATGGAAAAGTAAACCGCAAACAGAAACACAGCCAGAAGAGGA GGCATAA
Upstream 100 bases:
>100_bases CACATCAAATTTAATCTTCTAGTGATTGAATTTGTCACAAACCCTCACCTATTTCAATTCCAGACCACAATACGCCAACA GTTTGATAGAGGAGTGTTTA
Downstream 100 bases:
>100_bases TGTTAGAAGGTTTAGCGGTATGGGCACTCTTCATCTATCTGCTCCGTTTAGTCGGCATGCCTTGGAACAAAGCAACCAAA TCGTTCGCTTACCTAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Facilitator Superfamily
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITALTWIGFVWHWVWVLAVIFAF VDMEKAIINLRDTWKSKPQTETQPEEEA
Sequences:
>Translated_108_residues MSLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITALTWIGFVWHWVWVLAVIFAF VDMEKAIINLRDTWKSKPQTETQPEEEA >Mature_107_residues SLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITALTWIGFVWHWVWVLAVIFAFV DMEKAIINLRDTWKSKPQTETQPEEEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11992; Mature: 11861
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LTWIGFVWHWVWVLAVIFAFVDMEKAIINLRDTWKSKPQTETQPEEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SLLSVPFAGTGADTALHVVAAVVLIASVAGACYGFWKIHELPINKAHSKDHHQIGLITA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LTWIGFVWHWVWVLAVIFAFVDMEKAIINLRDTWKSKPQTETQPEEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA