| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is fruA [H]
Identifier: 156976411
GI number: 156976411
Start: 440061
End: 441968
Strand: Reverse
Name: fruA [H]
Synonym: VIBHAR_05184
Alternate gene names: 156976411
Gene position: 441968-440061 (Counterclockwise)
Preceding gene: 156976413
Following gene: 156976410
Centisome position: 20.05
GC content: 49.0
Gene sequence:
>1908_bases ATGATCACCAAACTAATAAATGAAGACTTGATTAAGCTTGATCTTCAAGCGACTTCAAAAGAAGACGTATTTAAAGAACT GGTTGCAGTTCTACACGCCCAAGGTCGTATTTCAGACCAAGAGCAATTTCTTGCAGATATAAAAGCACGTGAAGAATTAG GTAATACCGGATTTGAAGATGGCGTAGCTATCCCACACGCAAAAAGTGCAGCAGTCATCGAACCAGCGGTTGTGATCGGC GTAAGCAAATCAGGTATCGAATACGGCGCGGAAGACGGTTTGCCTTCAAAACTGTTCTTCATGATCGCTTCTCCAGACGG TGGCGATAACCACCACATCGAAGTACTTGCAGAGCTGTCTTCAAAATTAATTGAAGATGGTTTCATTGATGCGTTTTTAG GTGCAACAAACAGCCAAGACGCACTGGCACTCGTGCTTGCTAAAGAAGAGCCACAACCAGTGGCAGACGCTCCAACAAAC CAAGGCTTCATCATTGGTGTTACCGGTTGTCCTGCAGGCGTTGCACACACTTACCTAGCGGCAGAAGCGCTTGAGAAAGG TGCAGCAGCGATGGGGTACGAAATCAAGGTTGAAACGAATGGTTCAATCGGTGTGAAAAACAGCCCAACCGCAGAAGAAA TCGAACGTGCAGACGCAATCATTGTGGCATGTGACAAACAAGTCAACATGAACCGCTTTGCGGGCAAACGCGTGGTTAAA ACTAACGTAAAAGCCCCTATCCGCGATGCTCAAGGTCTGATTAACGAAGCGTTAAGCGCTCCAGAATACCAAGCAGAAGC AAGCAGCAATGCGCAAACTTCTGTTGCAAACAAGGCCTCTCAGGCTCGCTCTGACCTATACCGCTACTTGATGAACGGCG TATCACACATGATCCCATTCGTTGTAACGGGTGGTCTGTTGATTGCACTTGCTCTTGCAGTTGGTGGGCAGCCAAGTGAA GCCGGTATGGCAATTCCTGAAGGCAGCATGTGGAACCAAATCCTCAACGTAGGTGTGGTTGCCTTTACGCTGATGATTCC AATCCTAGCCGGTTACATTGCCTACGCGATTGCTGACCGCCCTGCTCTAGCTCCTGGTTTGATCGGTGGTTGGATTGCAA ACAACGGTTCTTTCTACGGCGCAGACGCAGGTACAGGCTTTATCGGTGCCATCATCGCTGGTCTGCTTGTGGGTTACTTC GTGAAGTGGATTACGTCGATTAACTACCACAAATTCATTCAACCTTTGGTGCCAATCATGATTGCGCCAATCACAGGTTC GCTATTCATCGCTGGTCTTTTCATCTTCGTTATCGGCGCGCCAATCGCAAGCCTAATGGACGGTCTGACTGCGCTACTAA CAAGCATGAGTACAGGTAACGTCGTTCTACTAGGCATCGTACTTGGTGGTATGGCTGGCTTCGATATGGGTGGTCCATTC AACAAGGTCGCGTTCCTATTCTCTGTAGGCATGATTGCGAGTGGTCAAACTCAATTTATGGGTGCGATGGCGTGTGCAAT CCCTGTTGCACCTCTAGGCATGGCACTGGCAACGGCACTGGGTCGTAAGTTCGACCTGTTCGAAGAATCAGAAACCGAAG CGGGTAAAGCAGCAGGCGCAATGGGTCTAGTTGGTATCTCTGAAGGTGCGATTCCGTTCGCAGCGCAAGATCCAATGTCA GTGATTCCAGCAAACGTACTTGGCTCAATGGTAGCGGCAGTAATGGCGTTCTCATTCGGCATTACCAACAGTGTTGCTCA CGGCGGTCCAGTTGTCGCTCTACTTGGCGCGATGAACCACCCAGTACTTGCTCTGATTTGTATGGCAGCTGGCGCAGTGG TTACCGCAGTAACGTGTGTAACTCTGAAGAAAGTTCGCAAAGCAAAAATGATGCAAGCAGCCGCTTAA
Upstream 100 bases:
>100_bases TACAATCGTCCAGTAAATGCATTTTTTCTTCACTACTGTCTCCGCTTGGTTAATTTCAAAATACCCCTGAAATAAAAATT ATATTTATAGGGGTTCGACA
Downstream 100 bases:
>100_bases TCACCCCTACCCCCAATGGCTCCTATGGCTTGGGCAATGTCGCCCAAGCCATAATTTTCTCTCATGGTGACACTCTATGT CTGATTTAACGATATCCGAT
Product: PTS system fructose-specific IIABC component
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MITKLINEDLIKLDLQATSKEDVFKELVAVLHAQGRISDQEQFLADIKAREELGNTGFEDGVAIPHAKSAAVIEPAVVIG VSKSGIEYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELSSKLIEDGFIDAFLGATNSQDALALVLAKEEPQPVADAPTN QGFIIGVTGCPAGVAHTYLAAEALEKGAAAMGYEIKVETNGSIGVKNSPTAEEIERADAIIVACDKQVNMNRFAGKRVVK TNVKAPIRDAQGLINEALSAPEYQAEASSNAQTSVANKASQARSDLYRYLMNGVSHMIPFVVTGGLLIALALAVGGQPSE AGMAIPEGSMWNQILNVGVVAFTLMIPILAGYIAYAIADRPALAPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYF VKWITSINYHKFIQPLVPIMIAPITGSLFIAGLFIFVIGAPIASLMDGLTALLTSMSTGNVVLLGIVLGGMAGFDMGGPF NKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATALGRKFDLFEESETEAGKAAGAMGLVGISEGAIPFAAQDPMS VIPANVLGSMVAAVMAFSFGITNSVAHGGPVVALLGAMNHPVLALICMAAGAVVTAVTCVTLKKVRKAKMMQAAA
Sequences:
>Translated_635_residues MITKLINEDLIKLDLQATSKEDVFKELVAVLHAQGRISDQEQFLADIKAREELGNTGFEDGVAIPHAKSAAVIEPAVVIG VSKSGIEYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELSSKLIEDGFIDAFLGATNSQDALALVLAKEEPQPVADAPTN QGFIIGVTGCPAGVAHTYLAAEALEKGAAAMGYEIKVETNGSIGVKNSPTAEEIERADAIIVACDKQVNMNRFAGKRVVK TNVKAPIRDAQGLINEALSAPEYQAEASSNAQTSVANKASQARSDLYRYLMNGVSHMIPFVVTGGLLIALALAVGGQPSE AGMAIPEGSMWNQILNVGVVAFTLMIPILAGYIAYAIADRPALAPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYF VKWITSINYHKFIQPLVPIMIAPITGSLFIAGLFIFVIGAPIASLMDGLTALLTSMSTGNVVLLGIVLGGMAGFDMGGPF NKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATALGRKFDLFEESETEAGKAAGAMGLVGISEGAIPFAAQDPMS VIPANVLGSMVAAVMAFSFGITNSVAHGGPVVALLGAMNHPVLALICMAAGAVVTAVTCVTLKKVRKAKMMQAAA >Mature_635_residues MITKLINEDLIKLDLQATSKEDVFKELVAVLHAQGRISDQEQFLADIKAREELGNTGFEDGVAIPHAKSAAVIEPAVVIG VSKSGIEYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELSSKLIEDGFIDAFLGATNSQDALALVLAKEEPQPVADAPTN QGFIIGVTGCPAGVAHTYLAAEALEKGAAAMGYEIKVETNGSIGVKNSPTAEEIERADAIIVACDKQVNMNRFAGKRVVK TNVKAPIRDAQGLINEALSAPEYQAEASSNAQTSVANKASQARSDLYRYLMNGVSHMIPFVVTGGLLIALALAVGGQPSE AGMAIPEGSMWNQILNVGVVAFTLMIPILAGYIAYAIADRPALAPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYF VKWITSINYHKFIQPLVPIMIAPITGSLFIAGLFIFVIGAPIASLMDGLTALLTSMSTGNVVLLGIVLGGMAGFDMGGPF NKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATALGRKFDLFEESETEAGKAAGAMGLVGISEGAIPFAAQDPMS VIPANVLGSMVAAVMAFSFGITNSVAHGGPVVALLGAMNHPVLALICMAAGAVVTAVTCVTLKKVRKAKMMQAAA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=465, Percent_Identity=41.7204301075269, Blast_Score=322, Evalue=3e-89, Organism=Escherichia coli, GI1786951, Length=592, Percent_Identity=34.4594594594595, Blast_Score=313, Evalue=1e-86, Organism=Escherichia coli, GI87082348, Length=477, Percent_Identity=33.9622641509434, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI1790386, Length=319, Percent_Identity=42.9467084639498, Blast_Score=234, Evalue=9e-63, Organism=Escherichia coli, GI1788729, Length=410, Percent_Identity=27.5609756097561, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1790387, Length=94, Percent_Identity=48.936170212766, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI2367327, Length=135, Percent_Identity=31.8518518518519, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788730, Length=95, Percent_Identity=41.0526315789474, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790390, Length=105, Percent_Identity=35.2380952380952, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 65612; Mature: 65612
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKLINEDLIKLDLQATSKEDVFKELVAVLHAQGRISDQEQFLADIKAREELGNTGFED CCHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC GVAIPHAKSAAVIEPAVVIGVSKSGIEYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELS CCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH SKLIEDGFIDAFLGATNSQDALALVLAKEEPQPVADAPTNQGFIIGVTGCPAGVAHTYLA HHHHHCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH AEALEKGAAAMGYEIKVETNGSIGVKNSPTAEEIERADAIIVACDKQVNMNRFAGKRVVK HHHHHCCCHHCCEEEEEECCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHCCHHEE TNVKAPIRDAQGLINEALSAPEYQAEASSNAQTSVANKASQARSDLYRYLMNGVSHMIPF CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVTGGLLIALALAVGGQPSEAGMAIPEGSMWNQILNVGVVAFTLMIPILAGYIAYAIADR HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PALAPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYFVKWITSINYHKFIQPLVPIM CCCCCCHHHCEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IAPITGSLFIAGLFIFVIGAPIASLMDGLTALLTSMSTGNVVLLGIVLGGMAGFDMGGPF HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCH NKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATALGRKFDLFEESETEAGKAAGA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC MGLVGISEGAIPFAAQDPMSVIPANVLGSMVAAVMAFSFGITNSVAHGGPVVALLGAMNH CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC PVLALICMAAGAVVTAVTCVTLKKVRKAKMMQAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITKLINEDLIKLDLQATSKEDVFKELVAVLHAQGRISDQEQFLADIKAREELGNTGFED CCHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC GVAIPHAKSAAVIEPAVVIGVSKSGIEYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELS CCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH SKLIEDGFIDAFLGATNSQDALALVLAKEEPQPVADAPTNQGFIIGVTGCPAGVAHTYLA HHHHHCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH AEALEKGAAAMGYEIKVETNGSIGVKNSPTAEEIERADAIIVACDKQVNMNRFAGKRVVK HHHHHCCCHHCCEEEEEECCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHCCHHEE TNVKAPIRDAQGLINEALSAPEYQAEASSNAQTSVANKASQARSDLYRYLMNGVSHMIPF CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVTGGLLIALALAVGGQPSEAGMAIPEGSMWNQILNVGVVAFTLMIPILAGYIAYAIADR HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PALAPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYFVKWITSINYHKFIQPLVPIM CCCCCCHHHCEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IAPITGSLFIAGLFIFVIGAPIASLMDGLTALLTSMSTGNVVLLGIVLGGMAGFDMGGPF HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCH NKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATALGRKFDLFEESETEAGKAAGA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC MGLVGISEGAIPFAAQDPMSVIPANVLGSMVAAVMAFSFGITNSVAHGGPVVALLGAMNH CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC PVLALICMAAGAVVTAVTCVTLKKVRKAKMMQAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]