Click here to switch to the map view.

The map label for this gene is rpl14e

Identifier: 156938048

GI number: 156938048

Start: 1123746

End: 1124057

Strand: Reverse

Name: rpl14e

Synonym: Igni_1261

Alternate gene names: 156938048

Gene position: 1124057-1123746 (Counterclockwise)

Preceding gene: 156938050

Following gene: 156938047

Centisome position: 86.63

GC content: 56.09

Gene sequence:

>312_bases
ATGCCGGCGATCGAGGTCGGTAGGGTATGCGTAATAATAGCCGGCAGGAGGGCCGGTAAGAAGTGTGTCATAGTAGACTT
GATAGACGACAAGTTCGTGTTGGTAACCGGCCCCAAGGAGCTTAACGGCGTCAAGAGGAGGAGGATGAACATAAAGCACT
TGGAGCCCTTGGACAAGAAGGTGGAGATAGAGAAGGGCGCCGACGACGCGAAGGTGCTCGAGGCGATAAGGCAAGCGGGC
TTGGAGGAGTTCATGAAGGAGGAAGTAAAGCCGGAGCTGCCGGTACCCCCGTCCCTCGGAGCTTACCTATGA

Upstream 100 bases:

>100_bases
CGCGACGAGTGCCAAGGCTTCGAGCGCCATGAGGCTCCCGAACGCCCTCACGGCAACCCTTAAAGACCTTGCAAGCTAGC
GCAGCCGGGGTCGAAGTTAC

Downstream 100 bases:

>100_bases
GGCGCCCGCACCCCATAGACTATTACGTCGGTATGACGAAGTATTTCCTAAATTTAGAAGCTTGCGAGGGAAGGGTCCTC
AGGCCCAAGGGGTTCCGGGT

Product: 50S ribosomal protein L14E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MPAIEVGRVCVIIAGRRAGKKCVIVDLIDDKFVLVTGPKELNGVKRRRMNIKHLEPLDKKVEIEKGADDAKVLEAIRQAG
LEEFMKEEVKPELPVPPSLGAYL

Sequences:

>Translated_103_residues
MPAIEVGRVCVIIAGRRAGKKCVIVDLIDDKFVLVTGPKELNGVKRRRMNIKHLEPLDKKVEIEKGADDAKVLEAIRQAG
LEEFMKEEVKPELPVPPSLGAYL
>Mature_102_residues
PAIEVGRVCVIIAGRRAGKKCVIVDLIDDKFVLVTGPKELNGVKRRRMNIKHLEPLDKKVEIEKGADDAKVLEAIRQAGL
EEFMKEEVKPELPVPPSLGAYL

Specific function: Unknown

COG id: COG2163

COG function: function code J; Ribosomal protein L14E/L6E/L27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L14e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL14E_IGNH4 (A8ABY5)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435844.1
- ProteinModelPortal:   A8ABY5
- SMR:   A8ABY5
- STRING:   A8ABY5
- GeneID:   5562502
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_1261
- eggNOG:   arNOG11588
- HOGENOM:   HBG551856
- OMA:   HIEPTDK
- BioCyc:   IHOS453591:IGNI_1261-MONOMER
- GO:   GO:0005840
- HAMAP:   MF_00721
- InterPro:   IPR005824
- InterPro:   IPR014722
- Gene3D:   G3DSA:2.30.30.30
- SMART:   SM00739

Pfam domain/function: PF00467 KOW

EC number: NA

Molecular weight: Translated: 11431; Mature: 11300

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIEVGRVCVIIAGRRAGKKCVIVDLIDDKFVLVTGPKELNGVKRRRMNIKHLEPLDKK
CCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCE
VEIEKGADDAKVLEAIRQAGLEEFMKEEVKPELPVPPSLGAYL
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAIEVGRVCVIIAGRRAGKKCVIVDLIDDKFVLVTGPKELNGVKRRRMNIKHLEPLDKK
CCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCE
VEIEKGADDAKVLEAIRQAGLEEFMKEEVKPELPVPPSLGAYL
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA