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The map label for this gene is 156937998

Identifier: 156937998

GI number: 156937998

Start: 1079930

End: 1080739

Strand: Reverse

Name: 156937998

Synonym: Igni_1211

Alternate gene names: NA

Gene position: 1080739-1079930 (Counterclockwise)

Preceding gene: 156938001

Following gene: 156937997

Centisome position: 83.29

GC content: 56.54

Gene sequence:

>810_bases
TTGTGTAGGAGCGAGCGCGGACGCGACGTCATGTACTTCGTTTACTTGGTAGGGACCGCGGGCTCTGGAAAGACTAGCAT
GACCAAGACGTTGGGCGACTGGATAGAGGACCACGAGATGAGCGCTTGCAGGGTTAACTTGGACCCCGCCGTGGAGGTCC
TCCCCTACGCTCCGGACGTAGACGTGCGGGAGTACGTCAATTACAAAGAGCTCTTGAAGGAGGGGCTGGGGCCTAACGGA
GCCTTGGTCAAGTCCGTGGACTTGATGCTCCTTTATGCGGACCAGCTCAGGGCGAGCATAGAGGAGACCGAGAGCAATTA
CGTAATAGTGGACACGCCCGGACAGCTGGAGCTCTTCGCGTATAGGAAGAGTACGCTGGAGCTATTCAAAAAGATAACTG
CTAACGACAAGGCAGTCCTAGTTTACCTAATAGACCCTTCGCTCTTCATAAGCGAGGGTTCCGCGGATCCCTACTCCTTC
ACCTCCGCGCTGCTGCTGGGCCTGAGCGTGACGGCCAGAATGAAGGTTCCGCTGATACACGTCATAAGCAAGTCCGATTT
ATTGAGCGAGGAAATTATAAACGTAATAGATTCTTGGTTGGAGGACTTGGGGTCCTTGGCGATGAGCTTGGGAGACGCTC
CCCCCGCGCTCGCGAGGGTGGTAGAAGCTCTAGAGGAGGCCGGGTTGGGCGAGGTGCTCTTCGCGTCTTCTCTAACCGAA
GAAGGGCTTGACAATATATACGCCGCGGTGCAGCGCGCTCTGGCGGGAGGAGAGGACTACGCAACGGAGGAGCCTTCCGC
GAGGTTGTGA

Upstream 100 bases:

>100_bases
CTCCGGGTCGGCAACCGGGAAAACTTTCCTCATAATGTCCTTAGCCGTAAGCGACGTCATGACTCTCTAAGGACGGGTAG
GCAACCAATAGATTAAAGGT

Downstream 100 bases:

>100_bases
ATCATGAGGTCCAACGCCCTCGAGGTCAAGTTAGACGAAATAAACGCGGAAATAGAGGAGCTAAGGAAGGAGAGAGCCGA
GTTAATTACAAAGATAAAGG

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MCRSERGRDVMYFVYLVGTAGSGKTSMTKTLGDWIEDHEMSACRVNLDPAVEVLPYAPDVDVREYVNYKELLKEGLGPNG
ALVKSVDLMLLYADQLRASIEETESNYVIVDTPGQLELFAYRKSTLELFKKITANDKAVLVYLIDPSLFISEGSADPYSF
TSALLLGLSVTARMKVPLIHVISKSDLLSEEIINVIDSWLEDLGSLAMSLGDAPPALARVVEALEEAGLGEVLFASSLTE
EGLDNIYAAVQRALAGGEDYATEEPSARL

Sequences:

>Translated_269_residues
MCRSERGRDVMYFVYLVGTAGSGKTSMTKTLGDWIEDHEMSACRVNLDPAVEVLPYAPDVDVREYVNYKELLKEGLGPNG
ALVKSVDLMLLYADQLRASIEETESNYVIVDTPGQLELFAYRKSTLELFKKITANDKAVLVYLIDPSLFISEGSADPYSF
TSALLLGLSVTARMKVPLIHVISKSDLLSEEIINVIDSWLEDLGSLAMSLGDAPPALARVVEALEEAGLGEVLFASSLTE
EGLDNIYAAVQRALAGGEDYATEEPSARL
>Mature_269_residues
MCRSERGRDVMYFVYLVGTAGSGKTSMTKTLGDWIEDHEMSACRVNLDPAVEVLPYAPDVDVREYVNYKELLKEGLGPNG
ALVKSVDLMLLYADQLRASIEETESNYVIVDTPGQLELFAYRKSTLELFKKITANDKAVLVYLIDPSLFISEGSADPYSF
TSALLLGLSVTARMKVPLIHVISKSDLLSEEIINVIDSWLEDLGSLAMSLGDAPPALARVVEALEEAGLGEVLFASSLTE
EGLDNIYAAVQRALAGGEDYATEEPSARL

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI223005897, Length=242, Percent_Identity=30.5785123966942, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI223005899, Length=213, Percent_Identity=30.9859154929577, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI256818742, Length=267, Percent_Identity=27.3408239700375, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI88759337, Length=177, Percent_Identity=31.638418079096, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI283046688, Length=277, Percent_Identity=26.3537906137184, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI256818744, Length=238, Percent_Identity=26.890756302521, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI223005901, Length=186, Percent_Identity=27.4193548387097, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17552462, Length=250, Percent_Identity=30.4, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25141394, Length=186, Percent_Identity=35.4838709677419, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17556506, Length=262, Percent_Identity=29.3893129770992, Blast_Score=100, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6322532, Length=269, Percent_Identity=26.3940520446097, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324836, Length=184, Percent_Identity=34.2391304347826, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323272, Length=182, Percent_Identity=30.2197802197802, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI18543199, Length=204, Percent_Identity=32.3529411764706, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21358191, Length=265, Percent_Identity=27.9245283018868, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI45550609, Length=181, Percent_Identity=30.3867403314917, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29339; Mature: 29339

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRSERGRDVMYFVYLVGTAGSGKTSMTKTLGDWIEDHEMSACRVNLDPAVEVLPYAPDV
CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHEECCCCCC
DVREYVNYKELLKEGLGPNGALVKSVDLMLLYADQLRASIEETESNYVIVDTPGQLELFA
CHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEH
YRKSTLELFKKITANDKAVLVYLIDPSLFISEGSADPYSFTSALLLGLSVTARMKVPLIH
HHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE
VISKSDLLSEEIINVIDSWLEDLGSLAMSLGDAPPALARVVEALEEAGLGEVLFASSLTE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
EGLDNIYAAVQRALAGGEDYATEEPSARL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCRSERGRDVMYFVYLVGTAGSGKTSMTKTLGDWIEDHEMSACRVNLDPAVEVLPYAPDV
CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHEECCCCCC
DVREYVNYKELLKEGLGPNGALVKSVDLMLLYADQLRASIEETESNYVIVDTPGQLELFA
CHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEH
YRKSTLELFKKITANDKAVLVYLIDPSLFISEGSADPYSFTSALLLGLSVTARMKVPLIH
HHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE
VISKSDLLSEEIINVIDSWLEDLGSLAMSLGDAPPALARVVEALEEAGLGEVLFASSLTE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
EGLDNIYAAVQRALAGGEDYATEEPSARL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA