| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156938001
Identifier: 156938001
GI number: 156938001
Start: 1082219
End: 1083244
Strand: Reverse
Name: 156938001
Synonym: Igni_1214
Alternate gene names: NA
Gene position: 1083244-1082219 (Counterclockwise)
Preceding gene: 156938002
Following gene: 156937998
Centisome position: 83.48
GC content: 57.12
Gene sequence:
>1026_bases TTGCCGGCGGAGCTGATCTCTCCCACGGCCCTCGTTTACATGTACAGAGGGCAGATACTCGATAAAGAGAAGGAGCTCAG CTTGCTCACCGCCTCCACCCCGGAGGAGGTGCAGAACGCGCTCAGGGGAACTTGGCTCGAGGGGGTAGCGGTAGAGGAGG CCAGCTCGGAGGAGCTGGAGAGGCTCGCGTGCCAGAAGTACTACGAGATACTGATGAAGCTCAGAGGCTACGTGCCCTCA TACAACTTGAAGCTGATGATAGACAACTTAGTGGACTGGCTCAGGGCAAGGGACGTGATGTTAATAGTGAGGGCCGCCGT CTCGGGGAAGGACTTGAAGGAGGTTGAGGGCTTCCTCCTATTTAAGGACGATCCGGTAGTGTCGACCACCCTCTTGGTGA TAAAGGAGAGGGGCTTGGAGGGCTTAGCTCAAGCTCTGAAGGGCTTCAAGATGGCTTCTTACATAGAACAAGCGGTGGAG ATGTACCGCAGCTACAAGGACTTGTCGGCCTTCGTGCTGGCTATGGACGTCATGTTGCTGAAGTCTATGTATAACGTAAT AACCAGGATAGGAAAGAGCATGAACGTGGGCACCAGCAAGATAGAGATAAGCAAGCTCCTCTGTCCGGAAATAGACGCTC TCGCCGTCACCCTCGTAGGGAGGGCCATCCTAAAGGGCTTGAAGCTGCCCGCGGAGCCGCCGGCGTGCGACCAAGACCTC GTGAGGGCCTTGGTCCAAGCCAAGCCGGACGAGGTGGTCCCGCTGCTCCGGAGGACCCCTTACGGCGAGGGCGTCCCCGA GGACCCGTACGAGGCTCTAGCCAAGGTTAGGGTTAACGCCATGAGGGTTCAGCGCAAGAGGGCCCTAGCGGCCTTCTCGG GCTACCCCTTCAGGGTGGCCGTCTTGTTAGCCTTACTGATATTGCTGAGGCTCGACGCGAGGGACGTAGCCACGATAATG ACTGGTAAAAAGCTTGGCTTGGACCCCTCCAAGATAGCTGAGAACTTGAGCTACGAGCTCTTCTAA
Upstream 100 bases:
>100_bases GGAGGCTCCAAGAGTTGCTCAACGAGCTGGAGAGGAAGTTCGAGAGCAACAAGGACAAGGCGGTCGAGGCGGTCTTGAGC GCCCTGTTCGGGTGAGCGCG
Downstream 100 bases:
>100_bases CCCTTTTATTTCTCTTCCTTACCGCCCTTTATCCTGTCCATGTAAGCGGCCACGGGCTTCCCTCCCTTAATCTCTATCAC TACCGCGAAGCCCGGCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPAELISPTALVYMYRGQILDKEKELSLLTASTPEEVQNALRGTWLEGVAVEEASSEELERLACQKYYEILMKLRGYVPS YNLKLMIDNLVDWLRARDVMLIVRAAVSGKDLKEVEGFLLFKDDPVVSTTLLVIKERGLEGLAQALKGFKMASYIEQAVE MYRSYKDLSAFVLAMDVMLLKSMYNVITRIGKSMNVGTSKIEISKLLCPEIDALAVTLVGRAILKGLKLPAEPPACDQDL VRALVQAKPDEVVPLLRRTPYGEGVPEDPYEALAKVRVNAMRVQRKRALAAFSGYPFRVAVLLALLILLRLDARDVATIM TGKKLGLDPSKIAENLSYELF
Sequences:
>Translated_341_residues MPAELISPTALVYMYRGQILDKEKELSLLTASTPEEVQNALRGTWLEGVAVEEASSEELERLACQKYYEILMKLRGYVPS YNLKLMIDNLVDWLRARDVMLIVRAAVSGKDLKEVEGFLLFKDDPVVSTTLLVIKERGLEGLAQALKGFKMASYIEQAVE MYRSYKDLSAFVLAMDVMLLKSMYNVITRIGKSMNVGTSKIEISKLLCPEIDALAVTLVGRAILKGLKLPAEPPACDQDL VRALVQAKPDEVVPLLRRTPYGEGVPEDPYEALAKVRVNAMRVQRKRALAAFSGYPFRVAVLLALLILLRLDARDVATIM TGKKLGLDPSKIAENLSYELF >Mature_340_residues PAELISPTALVYMYRGQILDKEKELSLLTASTPEEVQNALRGTWLEGVAVEEASSEELERLACQKYYEILMKLRGYVPSY NLKLMIDNLVDWLRARDVMLIVRAAVSGKDLKEVEGFLLFKDDPVVSTTLLVIKERGLEGLAQALKGFKMASYIEQAVEM YRSYKDLSAFVLAMDVMLLKSMYNVITRIGKSMNVGTSKIEISKLLCPEIDALAVTLVGRAILKGLKLPAEPPACDQDLV RALVQAKPDEVVPLLRRTPYGEGVPEDPYEALAKVRVNAMRVQRKRALAAFSGYPFRVAVLLALLILLRLDARDVATIMT GKKLGLDPSKIAENLSYELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38002; Mature: 37871
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAELISPTALVYMYRGQILDKEKELSLLTASTPEEVQNALRGTWLEGVAVEEASSEELE CCCCCCCHHHHHHHHHCCCCCCHHHHHHEECCCHHHHHHHHHCCHHCCEECCCCCHHHHH RLACQKYYEILMKLRGYVPSYNLKLMIDNLVDWLRARDVMLIVRAAVSGKDLKEVEGFLL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEE FKDDPVVSTTLLVIKERGLEGLAQALKGFKMASYIEQAVEMYRSYKDLSAFVLAMDVMLL ECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSMYNVITRIGKSMNVGTSKIEISKLLCPEIDALAVTLVGRAILKGLKLPAEPPACDQDL HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VRALVQAKPDEVVPLLRRTPYGEGVPEDPYEALAKVRVNAMRVQRKRALAAFSGYPFRVA HHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VLLALLILLRLDARDVATIMTGKKLGLDPSKIAENLSYELF HHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure PAELISPTALVYMYRGQILDKEKELSLLTASTPEEVQNALRGTWLEGVAVEEASSEELE CCCCCCHHHHHHHHHCCCCCCHHHHHHEECCCHHHHHHHHHCCHHCCEECCCCCHHHHH RLACQKYYEILMKLRGYVPSYNLKLMIDNLVDWLRARDVMLIVRAAVSGKDLKEVEGFLL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEE FKDDPVVSTTLLVIKERGLEGLAQALKGFKMASYIEQAVEMYRSYKDLSAFVLAMDVMLL ECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSMYNVITRIGKSMNVGTSKIEISKLLCPEIDALAVTLVGRAILKGLKLPAEPPACDQDL HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VRALVQAKPDEVVPLLRRTPYGEGVPEDPYEALAKVRVNAMRVQRKRALAAFSGYPFRVA HHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VLLALLILLRLDARDVATIMTGKKLGLDPSKIAENLSYELF HHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA