| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156937997
Identifier: 156937997
GI number: 156937997
Start: 1079042
End: 1079926
Strand: Reverse
Name: 156937997
Synonym: Igni_1210
Alternate gene names: NA
Gene position: 1079926-1079042 (Counterclockwise)
Preceding gene: 156937998
Following gene: 156937996
Centisome position: 83.23
GC content: 52.77
Gene sequence:
>885_bases ATGAGGTCCAACGCCCTCGAGGTCAAGTTAGACGAAATAAACGCGGAAATAGAGGAGCTAAGGAAGGAGAGAGCCGAGTT AATTACAAAGATAAAGGAGTTGAGGGCTCAGAGGAAGGCGCTCATAGAAAAGAAGAGGGCAGAGGTGGAGAGGCTGAGGG AGCTCAGGGCGGAGAGGGCGAAGCTAGTGGAGGAGCTGAGGCAGCTCAAGGAGTCCCGCAGGGAGGCGAAACAAAAGCTG AACCAAGTTCTGGAGGAGCTGAAGAAGCTCAAGTCCATAGTAGAGCAAGGCAAGAGGGGCCCTTCCCCCAACTCCTTGAG GAGGAGAATACAGCAGCTGGAGTGGAGGCTCCAGACCAACGTGTTGACGAGGGAGGAGGAAGAGGAGATAGTTAGGGAGA TAGCCAGGTTGGAGGAGGCCTTGGAGAGGCTCACCAAAGTCGAAGAGGCGAAGAAGAAGTTAATAGAGCTTAGGGCAGAG CTCGCCAGGCTCAGGCTCCTAATTAAGAGCTACAACGAGAACATAAACGAGATCTCCAACAAGATCAGCGAGGTGGACGG TAGGATAAGTAACGTCAGAGAGGAGGTGGACAGGCTGAACGGAAAGATAGACGAACTGAAAGCGAAGATAGACGAATACT CTAAGAAGGTCGAGGAGATAGACCTCAAGCTCTCCCAACTCCGGGAGGAAAAGAGGAAACTGGTAGAAGAGATAAAGAAG GGAGAGGCAATGGCGGCGAAGAACAAGGGTGAGGCCTTGCTAAGCGAGCTCGCCAAGAGGGCGAAGGAGAAGATGGAGCG GGGCGAACCGCTGACCTTCGAGGAGCTGCAAGCCTTAATGATGGTGGAGGGCGATGGTCAAGAAAATATTGGTAGTAACG GTTGA
Upstream 100 bases:
>100_bases AACCGAAGAAGGGCTTGACAATATATACGCCGCGGTGCAGCGCGCTCTGGCGGGAGGAGAGGACTACGCAACGGAGGAGC CTTCCGCGAGGTTGTGAATC
Downstream 100 bases:
>100_bases CGTGGACGACGACCTCGGGAAGGTGGGGATAAACACTCCTATTATAGGTAAGGAGGAGCTGCTGAAGGCGGCCGTGGAGT TCGGGCTCAAGAGGCCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRSNALEVKLDEINAEIEELRKERAELITKIKELRAQRKALIEKKRAEVERLRELRAERAKLVEELRQLKESRREAKQKL NQVLEELKKLKSIVEQGKRGPSPNSLRRRIQQLEWRLQTNVLTREEEEEIVREIARLEEALERLTKVEEAKKKLIELRAE LARLRLLIKSYNENINEISNKISEVDGRISNVREEVDRLNGKIDELKAKIDEYSKKVEEIDLKLSQLREEKRKLVEEIKK GEAMAAKNKGEALLSELAKRAKEKMERGEPLTFEELQALMMVEGDGQENIGSNG
Sequences:
>Translated_294_residues MRSNALEVKLDEINAEIEELRKERAELITKIKELRAQRKALIEKKRAEVERLRELRAERAKLVEELRQLKESRREAKQKL NQVLEELKKLKSIVEQGKRGPSPNSLRRRIQQLEWRLQTNVLTREEEEEIVREIARLEEALERLTKVEEAKKKLIELRAE LARLRLLIKSYNENINEISNKISEVDGRISNVREEVDRLNGKIDELKAKIDEYSKKVEEIDLKLSQLREEKRKLVEEIKK GEAMAAKNKGEALLSELAKRAKEKMERGEPLTFEELQALMMVEGDGQENIGSNG >Mature_294_residues MRSNALEVKLDEINAEIEELRKERAELITKIKELRAQRKALIEKKRAEVERLRELRAERAKLVEELRQLKESRREAKQKL NQVLEELKKLKSIVEQGKRGPSPNSLRRRIQQLEWRLQTNVLTREEEEEIVREIARLEEALERLTKVEEAKKKLIELRAE LARLRLLIKSYNENINEISNKISEVDGRISNVREEVDRLNGKIDELKAKIDEYSKKVEEIDLKLSQLREEKRKLVEEIKK GEAMAAKNKGEALLSELAKRAKEKMERGEPLTFEELQALMMVEGDGQENIGSNG
Specific function: Unknown
COG id: COG1340
COG function: function code S; Uncharacterized archaeal coiled-coil protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34416; Mature: 34416
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSNALEVKLDEINAEIEELRKERAELITKIKELRAQRKALIEKKRAEVERLRELRAERA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVEELRQLKESRREAKQKLNQVLEELKKLKSIVEQGKRGPSPNSLRRRIQQLEWRLQTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VLTREEEEEIVREIARLEEALERLTKVEEAKKKLIELRAELARLRLLIKSYNENINEISN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KISEVDGRISNVREEVDRLNGKIDELKAKIDEYSKKVEEIDLKLSQLREEKRKLVEEIKK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEAMAAKNKGEALLSELAKRAKEKMERGEPLTFEELQALMMVEGDGQENIGSNG CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRSNALEVKLDEINAEIEELRKERAELITKIKELRAQRKALIEKKRAEVERLRELRAERA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVEELRQLKESRREAKQKLNQVLEELKKLKSIVEQGKRGPSPNSLRRRIQQLEWRLQTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VLTREEEEEIVREIARLEEALERLTKVEEAKKKLIELRAELARLRLLIKSYNENINEISN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KISEVDGRISNVREEVDRLNGKIDELKAKIDEYSKKVEEIDLKLSQLREEKRKLVEEIKK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEAMAAKNKGEALLSELAKRAKEKMERGEPLTFEELQALMMVEGDGQENIGSNG CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA