Definition Ignicoccus hospitalis KIN4/I chromosome, complete genome.
Accession NC_009776
Length 1,297,538

Click here to switch to the map view.

The map label for this gene is 156937843

Identifier: 156937843

GI number: 156937843

Start: 938239

End: 938622

Strand: Reverse

Name: 156937843

Synonym: Igni_1054

Alternate gene names: NA

Gene position: 938622-938239 (Counterclockwise)

Preceding gene: 156937844

Following gene: 156937842

Centisome position: 72.34

GC content: 63.02

Gene sequence:

>384_bases
TTGGCGGTGAACTCGGCGCTCTTCCTCTCGAACGCCATAAGGAAGGATACTATAGTGTACGTGAACGTCGAAGGGAGCGT
AATCGTAATAGACGGCTCCGCGGCGCGGAGGGTCTACCCGGACTCCGAGAGCTTGGTGGGGCTCTTCAAGGCCGTCAAGA
AGGGAAAGAGGGTAGCCGGCGTGTCCTTGGGCGATTGCCCAGAGCCGGGGGAGCCTTGGTGCCCGGGCTCCCCGGTTAGG
GGGGAGGCCTTCTTGATCCCGAGGAGGTGCGGGCTGCCGGAGGAGTACACCTTGGAGCACGAGCTCGCGGTGCTTCAAAT
AGAGCTGGACCGCGCGGAGCGCGCCAGCCCTTCCAACCGCCTCGAGGGCAGAAGCTCTATATAG

Upstream 100 bases:

>100_bases
TGAGTATGTTTATATCAAACGTCCTTAAAGAGGTTAGGGAGGAGCTGGAGAGGTGCGAAAGGTCCTACTCTGCGAGCCCC
TAAGCCCTTGGAGGGCCGCC

Downstream 100 bases:

>100_bases
AGAAGGACGTGGCCTTCAGCCTCTCTTAATTAACCTCTTTAAATATTTGACGTGGGGTGGACCGTGGCTTCCCAAGTAGA
CTTAATGGCGCGCAAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAGVSLGDCPEPGEPWCPGSPVR
GEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNRLEGRSSI

Sequences:

>Translated_127_residues
MAVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAGVSLGDCPEPGEPWCPGSPVR
GEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNRLEGRSSI
>Mature_126_residues
AVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAGVSLGDCPEPGEPWCPGSPVRG
EAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNRLEGRSSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13751; Mature: 13620

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAG
CCCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCEEEC
VSLGDCPEPGEPWCPGSPVRGEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNR
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCC
LEGRSSI
CCCCCCC
>Mature Secondary Structure 
AVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAG
CCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCEEEC
VSLGDCPEPGEPWCPGSPVRGEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNR
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCC
LEGRSSI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA