| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937843
Identifier: 156937843
GI number: 156937843
Start: 938239
End: 938622
Strand: Reverse
Name: 156937843
Synonym: Igni_1054
Alternate gene names: NA
Gene position: 938622-938239 (Counterclockwise)
Preceding gene: 156937844
Following gene: 156937842
Centisome position: 72.34
GC content: 63.02
Gene sequence:
>384_bases TTGGCGGTGAACTCGGCGCTCTTCCTCTCGAACGCCATAAGGAAGGATACTATAGTGTACGTGAACGTCGAAGGGAGCGT AATCGTAATAGACGGCTCCGCGGCGCGGAGGGTCTACCCGGACTCCGAGAGCTTGGTGGGGCTCTTCAAGGCCGTCAAGA AGGGAAAGAGGGTAGCCGGCGTGTCCTTGGGCGATTGCCCAGAGCCGGGGGAGCCTTGGTGCCCGGGCTCCCCGGTTAGG GGGGAGGCCTTCTTGATCCCGAGGAGGTGCGGGCTGCCGGAGGAGTACACCTTGGAGCACGAGCTCGCGGTGCTTCAAAT AGAGCTGGACCGCGCGGAGCGCGCCAGCCCTTCCAACCGCCTCGAGGGCAGAAGCTCTATATAG
Upstream 100 bases:
>100_bases TGAGTATGTTTATATCAAACGTCCTTAAAGAGGTTAGGGAGGAGCTGGAGAGGTGCGAAAGGTCCTACTCTGCGAGCCCC TAAGCCCTTGGAGGGCCGCC
Downstream 100 bases:
>100_bases AGAAGGACGTGGCCTTCAGCCTCTCTTAATTAACCTCTTTAAATATTTGACGTGGGGTGGACCGTGGCTTCCCAAGTAGA CTTAATGGCGCGCAAGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAGVSLGDCPEPGEPWCPGSPVR GEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNRLEGRSSI
Sequences:
>Translated_127_residues MAVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAGVSLGDCPEPGEPWCPGSPVR GEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNRLEGRSSI >Mature_126_residues AVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAGVSLGDCPEPGEPWCPGSPVRG EAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNRLEGRSSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13751; Mature: 13620
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAG CCCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCEEEC VSLGDCPEPGEPWCPGSPVRGEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNR CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCC LEGRSSI CCCCCCC >Mature Secondary Structure AVNSALFLSNAIRKDTIVYVNVEGSVIVIDGSAARRVYPDSESLVGLFKAVKKGKRVAG CCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCEEEC VSLGDCPEPGEPWCPGSPVRGEAFLIPRRCGLPEEYTLEHELAVLQIELDRAERASPSNR CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCC LEGRSSI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA