| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937844
Identifier: 156937844
GI number: 156937844
Start: 938640
End: 939239
Strand: Reverse
Name: 156937844
Synonym: Igni_1055
Alternate gene names: NA
Gene position: 939239-938640 (Counterclockwise)
Preceding gene: 156937845
Following gene: 156937843
Centisome position: 72.39
GC content: 54.83
Gene sequence:
>600_bases ATGAGCCGTTTCGCCCCGTCTCCGCCAGGTGGTCGGTTGGACTTCGAGGAGGCCCACTCTTGTTCCTCGCTCTTCGCGTT CTTGCTCTTCGAGGCTTTGAGAACTAAGTACGGAGACCGGTTCGTGAAGGAGTTCTGCGAGAACTCCGAGGTCTACCCGC TGATGGGTGTTGCTGCAATAACCTTGGAGGCGAACGTGGCTATAACCTGCCCGGAGATGGCCGAGATGTTCAAGAGGGCC GACTACCCGCCCCACCTCAAGTCCTTGGTGGAGGAGGCTTGTAAGGGGAGGGGAGGGAGGCCTAAGGAAGAGATAATAGA GGAGTTCTTGAGGGAGTGCAACACGAAGGGATTGAAGGACGCGTTGCAGAAGCTCACCGAATTTAAGCTCGAAACTTTGA ACGATAAGGAGAACGAAATATTGAACGTGGCCTTCGGGAGGCTCCCACAAGCGGTCTCCTACGCGCAGAAGTACGACGTG GACGTGAGCAAGCCGGTCATGCAGAGCGTACTCCTAATGAGTATGTTTATATCAAACGTCCTTAAAGAGGTTAGGGAGGA GCTGGAGAGGTGCGAAAGGTCCTACTCTGCGAGCCCCTAA
Upstream 100 bases:
>100_bases GGGCCGGCGAGGCTTGCTACGAGGAGGAGGGCCACGCGTCTCCGGACTGCCTAATACGCGCCGTCCCGAGGCTGGCCAAG GCGGTGGGCGCCAAGTAAAT
Downstream 100 bases:
>100_bases GCCCTTGGAGGGCCGCCTTGGCGGTGAACTCGGCGCTCTTCCTCTCGAACGCCATAAGGAAGGATACTATAGTGTACGTG AACGTCGAAGGGAGCGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSRFAPSPPGGRLDFEEAHSCSSLFAFLLFEALRTKYGDRFVKEFCENSEVYPLMGVAAITLEANVAITCPEMAEMFKRA DYPPHLKSLVEEACKGRGGRPKEEIIEEFLRECNTKGLKDALQKLTEFKLETLNDKENEILNVAFGRLPQAVSYAQKYDV DVSKPVMQSVLLMSMFISNVLKEVREELERCERSYSASP
Sequences:
>Translated_199_residues MSRFAPSPPGGRLDFEEAHSCSSLFAFLLFEALRTKYGDRFVKEFCENSEVYPLMGVAAITLEANVAITCPEMAEMFKRA DYPPHLKSLVEEACKGRGGRPKEEIIEEFLRECNTKGLKDALQKLTEFKLETLNDKENEILNVAFGRLPQAVSYAQKYDV DVSKPVMQSVLLMSMFISNVLKEVREELERCERSYSASP >Mature_198_residues SRFAPSPPGGRLDFEEAHSCSSLFAFLLFEALRTKYGDRFVKEFCENSEVYPLMGVAAITLEANVAITCPEMAEMFKRAD YPPHLKSLVEEACKGRGGRPKEEIIEEFLRECNTKGLKDALQKLTEFKLETLNDKENEILNVAFGRLPQAVSYAQKYDVD VSKPVMQSVLLMSMFISNVLKEVREELERCERSYSASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22564; Mature: 22433
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFAPSPPGGRLDFEEAHSCSSLFAFLLFEALRTKYGDRFVKEFCENSEVYPLMGVAAI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLEANVAITCPEMAEMFKRADYPPHLKSLVEEACKGRGGRPKEEIIEEFLRECNTKGLKD EEECCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH ALQKLTEFKLETLNDKENEILNVAFGRLPQAVSYAQKYDVDVSKPVMQSVLLMSMFISNV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LKEVREELERCERSYSASP HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRFAPSPPGGRLDFEEAHSCSSLFAFLLFEALRTKYGDRFVKEFCENSEVYPLMGVAAI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLEANVAITCPEMAEMFKRADYPPHLKSLVEEACKGRGGRPKEEIIEEFLRECNTKGLKD EEECCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH ALQKLTEFKLETLNDKENEILNVAFGRLPQAVSYAQKYDVDVSKPVMQSVLLMSMFISNV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LKEVREELERCERSYSASP HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA