| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937724
Identifier: 156937724
GI number: 156937724
Start: 826824
End: 827396
Strand: Reverse
Name: 156937724
Synonym: Igni_0933
Alternate gene names: NA
Gene position: 827396-826824 (Counterclockwise)
Preceding gene: 156937727
Following gene: 156937723
Centisome position: 63.77
GC content: 60.03
Gene sequence:
>573_bases TTGTTCGAAATCTTGCGCTCCTTGGGGTTAAGCGTAGAGAGAGAGAAGCGCGCGTGGGAGGTCGCGACCCTTCTCGACAG GGGAGTACAAGTCCCTCGCCTCAAGTGCGTGGAAGTGGTCGGCCCCTTTGGAGCGCCCAAGACGGGGTGCCCTAAGCTGG CCGTCGACGGGGCGGCGAACGAGCTGGAAGATTACGACTTCCTCCTGTCAGACGGCGACGGGGCGAGGGCGGAGGAGCTC TCGAGGGCCTCGGAGGAGAAGTTGCTCTTCCTAGTCGTCCACGGCGACAACTTCGAGAAATTGATTAAAATCCCGTTGGG AAACAGGGTAATTCCGGTAGTTCAGAGCCCCAGAGGTAACGGCCTTTGTGTGCCGGCCTTTAGCGACGGCGACAAGGCGA AGCTCTTAGCCTCTATGATGGCGGACGAAGTGTTTGTGAGCGGGCTGGAAGCGGAGGAGGGAAACCCCACGAAGGAGCGG AAATTCGAGTTGTCCAAGGTGATGGGCGTTGAAGGTGCTCTGGGCGGTTACGGGCGCTGGGCACTGGATGAGGGAGAGCG CCGAGGTCTTTGA
Upstream 100 bases:
>100_bases ACTTCTTGGTACCGCCCACTCCCTCTCGACCGGGTGACCCCCAATCCGGGAGTTTATTAACGAAGGGTTTCATGATTTAT GTCTCCGCTGGGAGCCCTAT
Downstream 100 bases:
>100_bases GAAGCTAGCTAAGAGGGCACAAGTGACGGTAATATTTAGTAAGGCAGGCTACGAGGTGGCGAAGCTCTACGGCGTCTTGA AGAAGTTCGAGGTAGCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MFEILRSLGLSVEREKRAWEVATLLDRGVQVPRLKCVEVVGPFGAPKTGCPKLAVDGAANELEDYDFLLSDGDGARAEEL SRASEEKLLFLVVHGDNFEKLIKIPLGNRVIPVVQSPRGNGLCVPAFSDGDKAKLLASMMADEVFVSGLEAEEGNPTKER KFELSKVMGVEGALGGYGRWALDEGERRGL
Sequences:
>Translated_190_residues MFEILRSLGLSVEREKRAWEVATLLDRGVQVPRLKCVEVVGPFGAPKTGCPKLAVDGAANELEDYDFLLSDGDGARAEEL SRASEEKLLFLVVHGDNFEKLIKIPLGNRVIPVVQSPRGNGLCVPAFSDGDKAKLLASMMADEVFVSGLEAEEGNPTKER KFELSKVMGVEGALGGYGRWALDEGERRGL >Mature_190_residues MFEILRSLGLSVEREKRAWEVATLLDRGVQVPRLKCVEVVGPFGAPKTGCPKLAVDGAANELEDYDFLLSDGDGARAEEL SRASEEKLLFLVVHGDNFEKLIKIPLGNRVIPVVQSPRGNGLCVPAFSDGDKAKLLASMMADEVFVSGLEAEEGNPTKER KFELSKVMGVEGALGGYGRWALDEGERRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20632; Mature: 20632
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEILRSLGLSVEREKRAWEVATLLDRGVQVPRLKCVEVVGPFGAPKTGCPKLAVDGAAN CHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCCEEECCCCC ELEDYDFLLSDGDGARAEELSRASEEKLLFLVVHGDNFEKLIKIPLGNRVIPVVQSPRGN CCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCHHHEEECCCCCEEEEEEECCCCC GLCVPAFSDGDKAKLLASMMADEVFVSGLEAEEGNPTKERKFELSKVMGVEGALGGYGRW EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC ALDEGERRGL CCCCCCCCCC >Mature Secondary Structure MFEILRSLGLSVEREKRAWEVATLLDRGVQVPRLKCVEVVGPFGAPKTGCPKLAVDGAAN CHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCCEEECCCCC ELEDYDFLLSDGDGARAEELSRASEEKLLFLVVHGDNFEKLIKIPLGNRVIPVVQSPRGN CCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCHHHEEECCCCCEEEEEEECCCCC GLCVPAFSDGDKAKLLASMMADEVFVSGLEAEEGNPTKERKFELSKVMGVEGALGGYGRW EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC ALDEGERRGL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA