Click here to switch to the map view.

The map label for this gene is ygfS [C]

Identifier: 156937723

GI number: 156937723

Start: 826202

End: 826849

Strand: Reverse

Name: ygfS [C]

Synonym: Igni_0932

Alternate gene names: 156937723

Gene position: 826849-826202 (Counterclockwise)

Preceding gene: 156937724

Following gene: 156937719

Centisome position: 63.72

GC content: 58.95

Gene sequence:

>648_bases
ATGAGGGAGAGCGCCGAGGTCTTTGAGAAGCTAGCTAAGAGGGCACAAGTGACGGTAATATTTAGTAAGGCAGGCTACGA
GGTGGCGAAGCTCTACGGCGTCTTGAAGAAGTTCGAGGTAGCTACAGGGGGTTACTACAGGGAGCTGGAGGTGGACCCGA
AGCCCCTCTCCCACGTCTACGGGAGAGTGATGCGGAGGGCTTACGACGCGGTGGTAGTGGCCCCCATGACTGCGAACACC
GCAGCGAAGTTCGTGTTAGGAATAGCAGACAACTTGGTTACTACGGCTTTAGCCATGGCTAGGAAGGCCGGAGTGGAGAT
CTTGGCCTTGCCGACGGACGCCCCTTGGGTGAAGTCTACCACCCTACCGTGCGTCATTAACGACTGCGTGGGGTGCGAGG
CTTGTCCTCCCCAAGCCTCGTGTCCCACCGGAGCGATAGTGGGGGACAGAGTTAGGCGAATACTCTTGGAGAGGTGCGTG
GGGTGCGAGGCTTGCGTGGGCAAGTGCCCGTTCGGGGCTATATCATGCTTCTCCGAGGCGCCCTTCGAAGTCCACGAGTT
GGAGCTAGAAATACTGAAAAAGTTGGAGAAGTGGGCCAGGGTGTTGAAATCCCCCCGCGAGCTGGCCGCGGCCCTCGGGG
TCCGATGA

Upstream 100 bases:

>100_bases
GAAGCGGAGGAGGGAAACCCCACGAAGGAGCGGAAATTCGAGTTGTCCAAGGTGATGGGCGTTGAAGGTGCTCTGGGCGG
TTACGGGCGCTGGGCACTGG

Downstream 100 bases:

>100_bases
GGACCACCAGGCCGGTCCGGAGCGGTGAAGAGCCCCTAGCCTCACCGAGGACCTCAGAGGTACTTCCGCGGGTCAGCTAT
CTTGCCCTCCACCGCGCTTG

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRESAEVFEKLAKRAQVTVIFSKAGYEVAKLYGVLKKFEVATGGYYRELEVDPKPLSHVYGRVMRRAYDAVVVAPMTANT
AAKFVLGIADNLVTTALAMARKAGVEILALPTDAPWVKSTTLPCVINDCVGCEACPPQASCPTGAIVGDRVRRILLERCV
GCEACVGKCPFGAISCFSEAPFEVHELELEILKKLEKWARVLKSPRELAAALGVR

Sequences:

>Translated_215_residues
MRESAEVFEKLAKRAQVTVIFSKAGYEVAKLYGVLKKFEVATGGYYRELEVDPKPLSHVYGRVMRRAYDAVVVAPMTANT
AAKFVLGIADNLVTTALAMARKAGVEILALPTDAPWVKSTTLPCVINDCVGCEACPPQASCPTGAIVGDRVRRILLERCV
GCEACVGKCPFGAISCFSEAPFEVHELELEILKKLEKWARVLKSPRELAAALGVR
>Mature_215_residues
MRESAEVFEKLAKRAQVTVIFSKAGYEVAKLYGVLKKFEVATGGYYRELEVDPKPLSHVYGRVMRRAYDAVVVAPMTANT
AAKFVLGIADNLVTTALAMARKAGVEILALPTDAPWVKSTTLPCVINDCVGCEACPPQASCPTGAIVGDRVRRILLERCV
GCEACVGKCPFGAISCFSEAPFEVHELELEILKKLEKWARVLKSPRELAAALGVR

Specific function: Unknown

COG id: COG1036

COG function: function code C; Archaeal flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014073
- InterPro:   IPR003382 [H]

Pfam domain/function: PF00037 Fer4; PF02441 Flavoprotein [H]

EC number: NA

Molecular weight: Translated: 23333; Mature: 23333

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESAEVFEKLAKRAQVTVIFSKAGYEVAKLYGVLKKFEVATGGYYRELEVDPKPLSHVY
CCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
GRVMRRAYDAVVVAPMTANTAAKFVLGIADNLVTTALAMARKAGVEILALPTDAPWVKST
HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
TLPCVINDCVGCEACPPQASCPTGAIVGDRVRRILLERCVGCEACVGKCPFGAISCFSEA
CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCC
PFEVHELELEILKKLEKWARVLKSPRELAAALGVR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MRESAEVFEKLAKRAQVTVIFSKAGYEVAKLYGVLKKFEVATGGYYRELEVDPKPLSHVY
CCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
GRVMRRAYDAVVVAPMTANTAAKFVLGIADNLVTTALAMARKAGVEILALPTDAPWVKST
HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
TLPCVINDCVGCEACPPQASCPTGAIVGDRVRRILLERCVGCEACVGKCPFGAISCFSEA
CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCC
PFEVHELELEILKKLEKWARVLKSPRELAAALGVR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]