| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is yfeT [C]
Identifier: 156937581
GI number: 156937581
Start: 699195
End: 699800
Strand: Direct
Name: yfeT [C]
Synonym: Igni_0788
Alternate gene names: 156937581
Gene position: 699195-699800 (Clockwise)
Preceding gene: 156937580
Following gene: 156937582
Centisome position: 53.89
GC content: 54.29
Gene sequence:
>606_bases ATGAAGTACTTACTCGACACCATGAGGGAAATTGCCACATTTATATACTTCGCGAGCAAGATGTTGAAGGAGCATCAGGT TGAAGAGTTCACGAACTTGTTAGTGAAGATCTATAACACTCCCAACAGTAAGGTATTAGTAATGGGAGCCGGTCGCAGCG GCCTAGTGGCTAGGGCCTTTGCTATGAGGTTGATGCACCTAGGTTACAACGCTTACGTGCTGGGGGACACCATAGTTCCT AGCGTGAGAGAGGGGGACGTGGTAATTGCCATCTCTGGCTCGGGGAGCACCAAGCTCGTGTTGGCCGCGGCCGAGGCGGC CAAGCAAGTGGGGGCGACAGTTGTGGTCCTCACCAGCTACCCCAACTCCCCCTTAGGGAAGTTGGCCGACGTAGTGGTGG AAATACCCGGGAGGACTAAGTTGTCGAAATCGCAAGACTACTTCTCCCGCCAGATCCTCGGCCAGCACGAGCCCCTCGCC CCACTCGGAACGCTCTTCGAGATAACGGTCCAAGCCTTCTTGGACAGCTTGGTGGTAGAGCTCATGAACAGGCTGGGTAA GAGCGAGGAAGACTTAAGAATGCAGCACGCCAACATAGAGCTGTGA
Upstream 100 bases:
>100_bases AAGTAGTCAAGAGGGGACCCGGGGACTGGGTATACGTAATTAGGAGGGCCGAATTAAGAGATCTATAAAAACAGCCCCTC GGAGCGTCGCGAGGGACCAA
Downstream 100 bases:
>100_bases GGTTCGAGGTACTGAGGGAGTTCGACCCGTGGAACGGGCCCTTGTGCACGTGTCCTAGGAAGTACAGCCTCCAACCGTAT ACCGGTTGTCCGTTTTCCTG
Product: hexulose-6-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKYLLDTMREIATFIYFASKMLKEHQVEEFTNLLVKIYNTPNSKVLVMGAGRSGLVARAFAMRLMHLGYNAYVLGDTIVP SVREGDVVIAISGSGSTKLVLAAAEAAKQVGATVVVLTSYPNSPLGKLADVVVEIPGRTKLSKSQDYFSRQILGQHEPLA PLGTLFEITVQAFLDSLVVELMNRLGKSEEDLRMQHANIEL
Sequences:
>Translated_201_residues MKYLLDTMREIATFIYFASKMLKEHQVEEFTNLLVKIYNTPNSKVLVMGAGRSGLVARAFAMRLMHLGYNAYVLGDTIVP SVREGDVVIAISGSGSTKLVLAAAEAAKQVGATVVVLTSYPNSPLGKLADVVVEIPGRTKLSKSQDYFSRQILGQHEPLA PLGTLFEITVQAFLDSLVVELMNRLGKSEEDLRMQHANIEL >Mature_201_residues MKYLLDTMREIATFIYFASKMLKEHQVEEFTNLLVKIYNTPNSKVLVMGAGRSGLVARAFAMRLMHLGYNAYVLGDTIVP SVREGDVVIAISGSGSTKLVLAAAEAAKQVGATVVVLTSYPNSPLGKLADVVVEIPGRTKLSKSQDYFSRQILGQHEPLA PLGTLFEITVQAFLDSLVVELMNRLGKSEEDLRMQHANIEL
Specific function: Unknown
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788767, Length=106, Percent_Identity=38.6792452830189, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017552 - InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 22029; Mature: 22029
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLLDTMREIATFIYFASKMLKEHQVEEFTNLLVKIYNTPNSKVLVMGAGRSGLVARAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH AMRLMHLGYNAYVLGDTIVPSVREGDVVIAISGSGSTKLVLAAAEAAKQVGATVVVLTSY HHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHCCCEEEEEECC PNSPLGKLADVVVEIPGRTKLSKSQDYFSRQILGQHEPLAPLGTLFEITVQAFLDSLVVE CCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LMNRLGKSEEDLRMQHANIEL HHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure MKYLLDTMREIATFIYFASKMLKEHQVEEFTNLLVKIYNTPNSKVLVMGAGRSGLVARAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH AMRLMHLGYNAYVLGDTIVPSVREGDVVIAISGSGSTKLVLAAAEAAKQVGATVVVLTSY HHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHCCCEEEEEECC PNSPLGKLADVVVEIPGRTKLSKSQDYFSRQILGQHEPLAPLGTLFEITVQAFLDSLVVE CCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LMNRLGKSEEDLRMQHANIEL HHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]