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The map label for this gene is 156937582

Identifier: 156937582

GI number: 156937582

Start: 699797

End: 700654

Strand: Direct

Name: 156937582

Synonym: Igni_0789

Alternate gene names: NA

Gene position: 699797-700654 (Clockwise)

Preceding gene: 156937581

Following gene: 156937584

Centisome position: 53.93

GC content: 55.36

Gene sequence:

>858_bases
GTGAGGTTCGAGGTACTGAGGGAGTTCGACCCGTGGAACGGGCCCTTGTGCACGTGTCCTAGGAAGTACAGCCTCCAACC
GTATACCGGTTGTCCGTTTTCCTGCCTTTACTGTTACGCGACGTCCTATATAGGGAAGAAGTTCTACCCCAAAAAGAACT
TCTTGGAGAGGCTCGAGTGCGACTTGAGGAAGGCCGATAGATCAAAGGTGATAAACGTGTCTACTTCCAGCGACCCCTAC
CCGCCTATAGAGGAGAGGCTGGAGCTCACCAGGGGAGCGTTGAAACTCATCAGGGACTACGGCTTCAAGGTCCTCATAAC
GACGAAGGGGGTGCTCTTCGAGAGGGACGCGGATTTAATTGAAGGGATCGGGGCGATAATGGTTACGATAACTACCTTGG
ACGAGGAGTTGGCCAGAGTTATGGAGCCGGGCGCCCCCTCCCCCCTGGAGAGGCTCGAGGCCATCAAGAGGGTCTCGCAC
AGAGTTCCGGTAGGGGTCAGAATAGACCCGGTGGTCCCCGGGGTAAACGACTCGGAGGACGACATCAAAGAGATGTTGAA
GTTGTTGAAAAACGCTGGCGTAAAACACGTGACGACGTCAACTTACAAGGCGAAGCCGGACAACTTGAAAAGGATGACTA
AGGCCTTCCCGCATTTGAAGGAGTTGTACAAGAGCGCCGTAAAGGTTGGGGGTTACCTCTACTTGCCCGAGGAGCTCAGA
CGTGAGCTCTTGAGGCCCGTGGCCGAGGGGGCCAAGAGGTTGGGCATGAGCTATGCTTTCTGTAGGGAAGGTTTCCCCTT
CGAGGCGCCCTCTTGCGACGGCTCTCACTTGATACCTAGCAAGCACTTGCCCTCGTAG

Upstream 100 bases:

>100_bases
TAACGGTCCAAGCCTTCTTGGACAGCTTGGTGGTAGAGCTCATGAACAGGCTGGGTAAGAGCGAGGAAGACTTAAGAATG
CAGCACGCCAACATAGAGCT

Downstream 100 bases:

>100_bases
TTACAAGGGCAGGCCGCACAAGCGCTTTCCTTGGGACACTTCTTCGGTATGGACGCTCCTTCCTCTAGCCTTTTGATTAC
GTACTCGAGCACTTCTACGC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRFEVLREFDPWNGPLCTCPRKYSLQPYTGCPFSCLYCYATSYIGKKFYPKKNFLERLECDLRKADRSKVINVSTSSDPY
PPIEERLELTRGALKLIRDYGFKVLITTKGVLFERDADLIEGIGAIMVTITTLDEELARVMEPGAPSPLERLEAIKRVSH
RVPVGVRIDPVVPGVNDSEDDIKEMLKLLKNAGVKHVTTSTYKAKPDNLKRMTKAFPHLKELYKSAVKVGGYLYLPEELR
RELLRPVAEGAKRLGMSYAFCREGFPFEAPSCDGSHLIPSKHLPS

Sequences:

>Translated_285_residues
MRFEVLREFDPWNGPLCTCPRKYSLQPYTGCPFSCLYCYATSYIGKKFYPKKNFLERLECDLRKADRSKVINVSTSSDPY
PPIEERLELTRGALKLIRDYGFKVLITTKGVLFERDADLIEGIGAIMVTITTLDEELARVMEPGAPSPLERLEAIKRVSH
RVPVGVRIDPVVPGVNDSEDDIKEMLKLLKNAGVKHVTTSTYKAKPDNLKRMTKAFPHLKELYKSAVKVGGYLYLPEELR
RELLRPVAEGAKRLGMSYAFCREGFPFEAPSCDGSHLIPSKHLPS
>Mature_285_residues
MRFEVLREFDPWNGPLCTCPRKYSLQPYTGCPFSCLYCYATSYIGKKFYPKKNFLERLECDLRKADRSKVINVSTSSDPY
PPIEERLELTRGALKLIRDYGFKVLITTKGVLFERDADLIEGIGAIMVTITTLDEELARVMEPGAPSPLERLEAIKRVSH
RVPVGVRIDPVVPGVNDSEDDIKEMLKLLKNAGVKHVTTSTYKAKPDNLKRMTKAFPHLKELYKSAVKVGGYLYLPEELR
RELLRPVAEGAKRLGMSYAFCREGFPFEAPSCDGSHLIPSKHLPS

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 32262; Mature: 32262

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFEVLREFDPWNGPLCTCPRKYSLQPYTGCPFSCLYCYATSYIGKKFYPKKNFLERLEC
CCCHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DLRKADRSKVINVSTSSDPYPPIEERLELTRGALKLIRDYGFKVLITTKGVLFERDADLI
HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCHHHH
EGIGAIMVTITTLDEELARVMEPGAPSPLERLEAIKRVSHRVPVGVRIDPVVPGVNDSED
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
DIKEMLKLLKNAGVKHVTTSTYKAKPDNLKRMTKAFPHLKELYKSAVKVGGYLYLPEELR
HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHH
RELLRPVAEGAKRLGMSYAFCREGFPFEAPSCDGSHLIPSKHLPS
HHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFEVLREFDPWNGPLCTCPRKYSLQPYTGCPFSCLYCYATSYIGKKFYPKKNFLERLEC
CCCHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DLRKADRSKVINVSTSSDPYPPIEERLELTRGALKLIRDYGFKVLITTKGVLFERDADLI
HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCHHHH
EGIGAIMVTITTLDEELARVMEPGAPSPLERLEAIKRVSHRVPVGVRIDPVVPGVNDSED
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
DIKEMLKLLKNAGVKHVTTSTYKAKPDNLKRMTKAFPHLKELYKSAVKVGGYLYLPEELR
HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHH
RELLRPVAEGAKRLGMSYAFCREGFPFEAPSCDGSHLIPSKHLPS
HHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]