| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937580
Identifier: 156937580
GI number: 156937580
Start: 698485
End: 699162
Strand: Direct
Name: 156937580
Synonym: Igni_0787
Alternate gene names: NA
Gene position: 698485-699162 (Clockwise)
Preceding gene: 156937579
Following gene: 156937581
Centisome position: 53.83
GC content: 57.37
Gene sequence:
>678_bases TTGGGGAGTGGTGGTCCTCTGAAGGCGGCCGTGTTGACCTCCGGAGGCAAGGACAGTAACTACGCCGCTCACTGGGCGGC GCTTCACGGCTTCGAAATATGTTGTTTGCTAACCCTTAAGCCTCCCGAGGACTCCGAGCTCCTCCAGTTCAGCGCGGTAG AGACAGTGGGCTTACAAGCCAAGGCGATGGGCGTCGAGTGGATCTTCGAGGAGGGGGAAGAGGGCGCGGTAAGGGACCTA ATGGTCGCGGCCCGAGAGCGGGGGGCGAGCTACTTGGTCTCGGGGGCCTTGCTTTCCGACTACCAGAGGCAGCGCTTAGG GTACTTCGCGAAGGAAGCGGGCCTCGTTCCGGTCAACCCCCTCTGGAGGGTAGACCAAGAGAAGTACATGAGGATGCTCA TTAGACACGGCTTCGAGTTCATCCTAGTGAGGGTCGCCGCCGAAGGCTTGGGGCCGGAGTTCCTAGGAAGGGTAATAACT GCTGAAGACGTAGAGGAAATAATAAGGCGCGCGAGGAGGTACGGCTTCAACCCAGCCTTCGAGGGCGGCGAGGCGGAAAC GCTGGTATTGAGAGCTCCTTTATATAAAAAGAAGATATACGTTGAAGGCGAAGTAGTCAAGAGGGGACCCGGGGACTGGG TATACGTAATTAGGAGGGCCGAATTAAGAGATCTATAA
Upstream 100 bases:
>100_bases TAGCCGAAATAGAGGTCAAGGCTAAGTACAAAGTCCTAGATAAGATAAGCGAAATAATGATTTATTCCGTCTATAGGGCC GTCAAGAGGTTGCTGAAGGG
Downstream 100 bases:
>100_bases AAACAGCCCCTCGGAGCGTCGCGAGGGACCAAATGAAGTACTTACTCGACACCATGAGGGAAATTGCCACATTTATATAC TTCGCGAGCAAGATGTTGAA
Product: ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGSGGPLKAAVLTSGGKDSNYAAHWAALHGFEICCLLTLKPPEDSELLQFSAVETVGLQAKAMGVEWIFEEGEEGAVRDL MVAARERGASYLVSGALLSDYQRQRLGYFAKEAGLVPVNPLWRVDQEKYMRMLIRHGFEFILVRVAAEGLGPEFLGRVIT AEDVEEIIRRARRYGFNPAFEGGEAETLVLRAPLYKKKIYVEGEVVKRGPGDWVYVIRRAELRDL
Sequences:
>Translated_225_residues MGSGGPLKAAVLTSGGKDSNYAAHWAALHGFEICCLLTLKPPEDSELLQFSAVETVGLQAKAMGVEWIFEEGEEGAVRDL MVAARERGASYLVSGALLSDYQRQRLGYFAKEAGLVPVNPLWRVDQEKYMRMLIRHGFEFILVRVAAEGLGPEFLGRVIT AEDVEEIIRRARRYGFNPAFEGGEAETLVLRAPLYKKKIYVEGEVVKRGPGDWVYVIRRAELRDL >Mature_224_residues GSGGPLKAAVLTSGGKDSNYAAHWAALHGFEICCLLTLKPPEDSELLQFSAVETVGLQAKAMGVEWIFEEGEEGAVRDLM VAARERGASYLVSGALLSDYQRQRLGYFAKEAGLVPVNPLWRVDQEKYMRMLIRHGFEFILVRVAAEGLGPEFLGRVITA EDVEEIIRRARRYGFNPAFEGGEAETLVLRAPLYKKKIYVEGEVVKRGPGDWVYVIRRAELRDL
Specific function: Unknown
COG id: COG2102
COG function: function code R; Predicted ATPases of PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18087809, Length=235, Percent_Identity=32.3404255319149, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI86561065, Length=218, Percent_Identity=30.2752293577982, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI85726382, Length=220, Percent_Identity=31.3636363636364, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005237 - InterPro: IPR022427 - InterPro: IPR002761 - InterPro: IPR014729 [H]
Pfam domain/function: PF01902 ATP_bind_4 [H]
EC number: NA
Molecular weight: Translated: 25063; Mature: 24932
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGGPLKAAVLTSGGKDSNYAAHWAALHGFEICCLLTLKPPEDSELLQFSAVETVGLQA CCCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCH KAMGVEWIFEEGEEGAVRDLMVAARERGASYLVSGALLSDYQRQRLGYFAKEAGLVPVNP HHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LWRVDQEKYMRMLIRHGFEFILVRVAAEGLGPEFLGRVITAEDVEEIIRRARRYGFNPAF HHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC EGGEAETLVLRAPLYKKKIYVEGEVVKRGPGDWVYVIRRAELRDL CCCCCCEEEEECCCCCCEEEEECEEEECCCCCEEEEEEEHHHCCC >Mature Secondary Structure GSGGPLKAAVLTSGGKDSNYAAHWAALHGFEICCLLTLKPPEDSELLQFSAVETVGLQA CCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCH KAMGVEWIFEEGEEGAVRDLMVAARERGASYLVSGALLSDYQRQRLGYFAKEAGLVPVNP HHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LWRVDQEKYMRMLIRHGFEFILVRVAAEGLGPEFLGRVITAEDVEEIIRRARRYGFNPAF HHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC EGGEAETLVLRAPLYKKKIYVEGEVVKRGPGDWVYVIRRAELRDL CCCCCCEEEEECCCCCCEEEEECEEEECCCCCEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]