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The map label for this gene is rps19e [H]

Identifier: 156937078

GI number: 156937078

Start: 243679

End: 244146

Strand: Direct

Name: rps19e [H]

Synonym: Igni_0284

Alternate gene names: 156937078

Gene position: 243679-244146 (Clockwise)

Preceding gene: 156937072

Following gene: 156937079

Centisome position: 18.78

GC content: 61.11

Gene sequence:

>468_bases
TTGATCACGCCGAGGGAAGTGCCTCCGGAGAGGTTCAACCAGAGGTTGGCTATGTACTTGAAGGAGAGGTTCCCCGAGAT
CAGGCCCCCGGAGTGGGCCATGTACGCGAAGACCGGCTGCTTCAAGGACAGACCCCCCTTGGACGAGGACTGGTGGTACT
ACAGGGCGGCGAGCATACTGAGGAAGCTGTACCTCGCCGGGAGGCCTCTCGGTATAGAGACGTTCAGGACGATCTACGGC
GGCCGCCAGAGGAGGGGGGTCGCCCCTCCGCACTTCAGGAAGGCAGGGGGCTCCCACATAAGGAAGATACTCCAACAGCT
GGAGAAGGCCGGCTTGGTGAAGAAGGTAAAGGGCCAAGGGAGGGTCCTAACCCCCGCCGGGAGGAGCGTGCTCGACCACG
TGGCCTACTTCACCTTCCAAGAAATAGCCGAAGAGATGGCCGAGCTCAAGAAGTACGCCGAGAGGTGA

Upstream 100 bases:

>100_bases
GGCGCTCCCTTTAGCCTCTTTAAGTTATCGCCCCGGGCGGCCCGCGGACCTTGAAGGTACTTAAATAGCTCGGCCGGAGG
GTCGCCGGGGTAGCTAAGGC

Downstream 100 bases:

>100_bases
GAGTATGAGCTTCGACGACAGGGAGCTTGAGGAAATAAGGAAGAAGAAGTTAATGGAGCTGCAAAAGCGTATGGAAGAGG
AGAGGAAGGCGGAAGAACTG

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MITPREVPPERFNQRLAMYLKERFPEIRPPEWAMYAKTGCFKDRPPLDEDWWYYRAASILRKLYLAGRPLGIETFRTIYG
GRQRRGVAPPHFRKAGGSHIRKILQQLEKAGLVKKVKGQGRVLTPAGRSVLDHVAYFTFQEIAEEMAELKKYAER

Sequences:

>Translated_155_residues
MITPREVPPERFNQRLAMYLKERFPEIRPPEWAMYAKTGCFKDRPPLDEDWWYYRAASILRKLYLAGRPLGIETFRTIYG
GRQRRGVAPPHFRKAGGSHIRKILQQLEKAGLVKKVKGQGRVLTPAGRSVLDHVAYFTFQEIAEEMAELKKYAER
>Mature_155_residues
MITPREVPPERFNQRLAMYLKERFPEIRPPEWAMYAKTGCFKDRPPLDEDWWYYRAASILRKLYLAGRPLGIETFRTIYG
GRQRRGVAPPHFRKAGGSHIRKILQQLEKAGLVKKVKGQGRVLTPAGRSVLDHVAYFTFQEIAEEMAELKKYAER

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=134, Percent_Identity=41.7910447761194, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17508697, Length=132, Percent_Identity=43.1818181818182, Blast_Score=109, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6324027, Length=141, Percent_Identity=34.0425531914894, Blast_Score=79, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324451, Length=141, Percent_Identity=34.0425531914894, Blast_Score=79, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649452, Length=134, Percent_Identity=41.7910447761194, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17647891, Length=134, Percent_Identity=39.5522388059701, Blast_Score=92, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24642576, Length=134, Percent_Identity=39.5522388059701, Blast_Score=92, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24642574, Length=134, Percent_Identity=39.5522388059701, Blast_Score=92, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 18106; Mature: 18106

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPREVPPERFNQRLAMYLKERFPEIRPPEWAMYAKTGCFKDRPPLDEDWWYYRAASIL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
RKLYLAGRPLGIETFRTIYGGRQRRGVAPPHFRKAGGSHIRKILQQLEKAGLVKKVKGQG
HHHHHCCCCCCHHHHHHHHCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
RVLTPAGRSVLDHVAYFTFQEIAEEMAELKKYAER
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITPREVPPERFNQRLAMYLKERFPEIRPPEWAMYAKTGCFKDRPPLDEDWWYYRAASIL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
RKLYLAGRPLGIETFRTIYGGRQRRGVAPPHFRKAGGSHIRKILQQLEKAGLVKKVKGQG
HHHHHCCCCCCHHHHHHHHCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
RVLTPAGRSVLDHVAYFTFQEIAEEMAELKKYAER
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]