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The map label for this gene is 156937079

Identifier: 156937079

GI number: 156937079

Start: 244151

End: 244501

Strand: Direct

Name: 156937079

Synonym: Igni_0285

Alternate gene names: NA

Gene position: 244151-244501 (Clockwise)

Preceding gene: 156937078

Following gene: 156937080

Centisome position: 18.82

GC content: 57.55

Gene sequence:

>351_bases
ATGAGCTTCGACGACAGGGAGCTTGAGGAAATAAGGAAGAAGAAGTTAATGGAGCTGCAAAAGCGTATGGAAGAGGAGAG
GAAGGCGGAAGAACTGAGGAAGAAGCAGCAGCTGGTGAAGGAGACTATACTGAAGAGCATACTGACCAGCGAGGCCCGCG
CGAGGCTGGCTAACGTCAAGCTCGTGAGGCCCGAGCTCGCGGAGCAAGTGGAGAACTACCTAATAGCCCTCGCCCAGGCC
GGGAGGATCGCCAGGCCCCTCACGGACGCGGAGGTAAAGGAAATATTGGCCCGGCTGGCGGGCGAGACGCGCAGAGAAGG
GAGGATAAACATAAAGGAGAGGGGGTGGTGA

Upstream 100 bases:

>100_bases
CCCGCCGGGAGGAGCGTGCTCGACCACGTGGCCTACTTCACCTTCCAAGAAATAGCCGAAGAGATGGCCGAGCTCAAGAA
GTACGCCGAGAGGTGAGAGT

Downstream 100 bases:

>100_bases
GGGTGGCCCATTACAAGCACGTGGCCAAGAAGATTAGGCTAGGCAAGAAGACTAAGCAGAACAGGGCCCTCCCCGCGTGG
GTTATATTAAAGACCCGCAG

Product: DNA-binding TFAR19-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSFDDRELEEIRKKKLMELQKRMEEERKAEELRKKQQLVKETILKSILTSEARARLANVKLVRPELAEQVENYLIALAQA
GRIARPLTDAEVKEILARLAGETRREGRINIKERGW

Sequences:

>Translated_116_residues
MSFDDRELEEIRKKKLMELQKRMEEERKAEELRKKQQLVKETILKSILTSEARARLANVKLVRPELAEQVENYLIALAQA
GRIARPLTDAEVKEILARLAGETRREGRINIKERGW
>Mature_115_residues
SFDDRELEEIRKKKLMELQKRMEEERKAEELRKKQQLVKETILKSILTSEARARLANVKLVRPELAEQVENYLIALAQAG
RIARPLTDAEVKEILARLAGETRREGRINIKERGW

Specific function: Unknown

COG id: COG2118

COG function: function code R; DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PDCD5 family [H]

Homologues:

Organism=Homo sapiens, GI4759224, Length=112, Percent_Identity=33.0357142857143, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022889
- InterPro:   IPR002836 [H]

Pfam domain/function: PF01984 dsDNA_bind [H]

EC number: NA

Molecular weight: Translated: 13610; Mature: 13479

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDDRELEEIRKKKLMELQKRMEEERKAEELRKKQQLVKETILKSILTSEARARLANVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRPELAEQVENYLIALAQAGRIARPLTDAEVKEILARLAGETRREGRINIKERGW
HHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SFDDRELEEIRKKKLMELQKRMEEERKAEELRKKQQLVKETILKSILTSEARARLANVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRPELAEQVENYLIALAQAGRIARPLTDAEVKEILARLAGETRREGRINIKERGW
HHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA