| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937072
Identifier: 156937072
GI number: 156937072
Start: 238454
End: 239641
Strand: Direct
Name: 156937072
Synonym: Igni_0277
Alternate gene names: NA
Gene position: 238454-239641 (Clockwise)
Preceding gene: 156937071
Following gene: 156937078
Centisome position: 18.38
GC content: 57.15
Gene sequence:
>1188_bases ATGTCCGAAGTAGCGATGGTCTACGACTTCAGCAGGAAGAAATGCGGAATAAAGGAGTACGGGGACGCCCTGGTCAAGTG GCTCAAGGCCATTGGGGTGGACGTGGAGGTTTGCGACTTGAAGAAGGAGAGCTACGCGGACTCCGTGAGGGCGGCGCTCT GCGCCTCGCGCGGGGAGCTGGTGCACACCCAACACGAATACGGCCTCTTCAAGGGCCACTTCGGCTGGTCGCAGATATTC TACTACTTGACCCTAAAGCTCTTGAGGAAGAGGGACATCACCACTCTCCACACGGTGTTAACGCCCAAACAAGCCATTGA GAACTACGTCAAGTTTAGCCTTCCGTACGTCAAGGAGAGCTTGATAGAAACGATGAGGGGGTTCTTGATAAGCGCTCTGG TGCCTTACATACCCCAAGCCTTCAGCGACCTCCTAGTGGTGCACACCCTCCGGGGCTACGAGCTCCTCCCGTGGCTGGGG AAGATGAAGGCCGTCCTAATACCTCACTTCACCCCCAAGCCCTCGTGGAAGATAGACGAGATTATTGAGAAATGTAGAAA TATGATGAGTAAAAAGGTGGAGCGCGTGGAGATAGTCACCCCCGGGTTCATCAGGCCGACCAAGAGGTACGACTGGGCGG TCCACGCGCTCGTGAGCTTGGCCTTGGAGGGCTTGGAGGTCCCGCTGAGGTACACCGTGGTGGGCACCACACAAGACGAG GCGGGGGAGAGGTGGTACCAATACATGAAGGACTTCATTGACGAGATATCTAAGTACACCGAGAAGCTGGGGCTGGAGAT AAGGATAGTGAAGAAAATGATGACTAAAGAGGAGCTGATAGAGAGGGCTTGTTCGGCCCACGTGGTCTTGCTCCCTTACT CGGACCCCACCCAAGAGGCCTCCGGCATAGTCCACGACTCGTTGACTTGCGGGAAACACATAGTGGTCCCGAAGATAGGG GACGTCCGCAACTACCCGGAGGCCTTCCACCCCTTCGACATAGACGACCCGCTGCCTACGATGAAACAAGCCTTGAGGAG GGCGATAGACGAGGTTTTGAGGGGCAACTTGTGCAACCCGGGGGCCTTGGCGTACGCGCGCTTCACCGCCGTCGACCGCG TTGCGAGGAGGCACGCTGAGCTCTACGCCACGCTCCGCTCTCGAAGATCTCCTCGGCGACCCTCTTGA
Upstream 100 bases:
>100_bases GAGATGGAGAAGCTGCCTGTAACGATAACTAGGTGGCCGCCCCAAGAGAGGAAGTACTAACCTATTTCTCCCCTTAGTCC TAACCCTAGGAAGCGAAGAA
Downstream 100 bases:
>100_bases GCTCGTCGGACCTCCTCTCTTGTGCCGCCTTCACGAGCTCGTAGAGGAGCCGGCCGAGCTCCTTCCCGTAGAACTCTATT ATCAAGTCCTCCAGCCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSEVAMVYDFSRKKCGIKEYGDALVKWLKAIGVDVEVCDLKKESYADSVRAALCASRGELVHTQHEYGLFKGHFGWSQIF YYLTLKLLRKRDITTLHTVLTPKQAIENYVKFSLPYVKESLIETMRGFLISALVPYIPQAFSDLLVVHTLRGYELLPWLG KMKAVLIPHFTPKPSWKIDEIIEKCRNMMSKKVERVEIVTPGFIRPTKRYDWAVHALVSLALEGLEVPLRYTVVGTTQDE AGERWYQYMKDFIDEISKYTEKLGLEIRIVKKMMTKEELIERACSAHVVLLPYSDPTQEASGIVHDSLTCGKHIVVPKIG DVRNYPEAFHPFDIDDPLPTMKQALRRAIDEVLRGNLCNPGALAYARFTAVDRVARRHAELYATLRSRRSPRRPS
Sequences:
>Translated_395_residues MSEVAMVYDFSRKKCGIKEYGDALVKWLKAIGVDVEVCDLKKESYADSVRAALCASRGELVHTQHEYGLFKGHFGWSQIF YYLTLKLLRKRDITTLHTVLTPKQAIENYVKFSLPYVKESLIETMRGFLISALVPYIPQAFSDLLVVHTLRGYELLPWLG KMKAVLIPHFTPKPSWKIDEIIEKCRNMMSKKVERVEIVTPGFIRPTKRYDWAVHALVSLALEGLEVPLRYTVVGTTQDE AGERWYQYMKDFIDEISKYTEKLGLEIRIVKKMMTKEELIERACSAHVVLLPYSDPTQEASGIVHDSLTCGKHIVVPKIG DVRNYPEAFHPFDIDDPLPTMKQALRRAIDEVLRGNLCNPGALAYARFTAVDRVARRHAELYATLRSRRSPRRPS >Mature_394_residues SEVAMVYDFSRKKCGIKEYGDALVKWLKAIGVDVEVCDLKKESYADSVRAALCASRGELVHTQHEYGLFKGHFGWSQIFY YLTLKLLRKRDITTLHTVLTPKQAIENYVKFSLPYVKESLIETMRGFLISALVPYIPQAFSDLLVVHTLRGYELLPWLGK MKAVLIPHFTPKPSWKIDEIIEKCRNMMSKKVERVEIVTPGFIRPTKRYDWAVHALVSLALEGLEVPLRYTVVGTTQDEA GERWYQYMKDFIDEISKYTEKLGLEIRIVKKMMTKEELIERACSAHVVLLPYSDPTQEASGIVHDSLTCGKHIVVPKIGD VRNYPEAFHPFDIDDPLPTMKQALRRAIDEVLRGNLCNPGALAYARFTAVDRVARRHAELYATLRSRRSPRRPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45309; Mature: 45178
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVAMVYDFSRKKCGIKEYGDALVKWLKAIGVDVEVCDLKKESYADSVRAALCASRGEL CCCCEEEECCCHHCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCE VHTQHEYGLFKGHFGWSQIFYYLTLKLLRKRDITTLHTVLTPKQAIENYVKFSLPYVKES EECHHHCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCHHHHHH LIETMRGFLISALVPYIPQAFSDLLVVHTLRGYELLPWLGKMKAVLIPHFTPKPSWKIDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCCCHHH IIEKCRNMMSKKVERVEIVTPGFIRPTKRYDWAVHALVSLALEGLEVPLRYTVVGTTQDE HHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHH AGERWYQYMKDFIDEISKYTEKLGLEIRIVKKMMTKEELIERACSAHVVLLPYSDPTQEA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHH SGIVHDSLTCGKHIVVPKIGDVRNYPEAFHPFDIDDPLPTMKQALRRAIDEVLRGNLCNP CCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC GALAYARFTAVDRVARRHAELYATLRSRRSPRRPS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEVAMVYDFSRKKCGIKEYGDALVKWLKAIGVDVEVCDLKKESYADSVRAALCASRGEL CCCEEEECCCHHCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCE VHTQHEYGLFKGHFGWSQIFYYLTLKLLRKRDITTLHTVLTPKQAIENYVKFSLPYVKES EECHHHCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCHHHHHH LIETMRGFLISALVPYIPQAFSDLLVVHTLRGYELLPWLGKMKAVLIPHFTPKPSWKIDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCCCHHH IIEKCRNMMSKKVERVEIVTPGFIRPTKRYDWAVHALVSLALEGLEVPLRYTVVGTTQDE HHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHH AGERWYQYMKDFIDEISKYTEKLGLEIRIVKKMMTKEELIERACSAHVVLLPYSDPTQEA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHH SGIVHDSLTCGKHIVVPKIGDVRNYPEAFHPFDIDDPLPTMKQALRRAIDEVLRGNLCNP CCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC GALAYARFTAVDRVARRHAELYATLRSRRSPRRPS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA