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The map label for this gene is 156936854

Identifier: 156936854

GI number: 156936854

Start: 55751

End: 56284

Strand: Reverse

Name: 156936854

Synonym: Igni_0059

Alternate gene names: NA

Gene position: 56284-55751 (Counterclockwise)

Preceding gene: 156936857

Following gene: 156936851

Centisome position: 4.34

GC content: 47.38

Gene sequence:

>534_bases
ATGACGATAGTGAGGATACCTTTGGATGTAATCTGCGTCAAGACCGGAGTCCTCTGTCCGAGCTGTCAGAGAAAGGTGGA
TGAAGGGATAGTAAAACCCATAGAAGTAGACATAATGAGGGTGCTACTGAATTTAGAAAACGAAATAAAGGAACTGAGAA
ACGCGACGTACGAGAAAACCTACCAAGTTGACAATACATTGATCGTAGTGATAAAAGTTGACAAAGCCTCCAACGAACTC
GCTAAGAAGATCCGACAAGCGCTGGTCAAGGAGTTAGGCCGCGACTACCGAATAAGGGTGTTGTTAAAGAGCGAGGAGGA
CCCGAGGCAGTTAGTCTCCCAACTGTTGATCCCCCTGACAGTAAAGGGAATAAACATTATGTGGCTACCCGACGGGACGC
AGAAGTACGTCGTTAACGTTAGAGGCCCTCTGAGGAGGCTGGCGATACCTAAGGAACAAGTGGAGAAGATTCTGGAAGAG
ATACTAGGCGCCCCGGTAGAAATACGAGTGGAGACACCGAGGAGAAGTTTTTAA

Upstream 100 bases:

>100_bases
CGCCGGTCATAATAACTACAAGGCCGCAGGTGTCGCCGCTCAAAATAAAATCCTTTTATTCCGTCACGCGCCAGCGCCAC
TCGAAGAAAATGACGAGGTG

Downstream 100 bases:

>100_bases
ATTACAAAAACGCGTGGATCGATCCTAGTCTTAGCTTTGTGTCCCCTCTGACTCTTGCTCCCCTTCGGGCTCCCCTTCGG
GCCTCTTTATCGGTTCTACG

Product: transcription elongation factor

Products: NA

Alternate protein names: Transcription Elongation Factor NusA; Transcription Elongation Factor

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTIVRIPLDVICVKTGVLCPSCQRKVDEGIVKPIEVDIMRVLLNLENEIKELRNATYEKTYQVDNTLIVVIKVDKASNEL
AKKIRQALVKELGRDYRIRVLLKSEEDPRQLVSQLLIPLTVKGINIMWLPDGTQKYVVNVRGPLRRLAIPKEQVEKILEE
ILGAPVEIRVETPRRSF

Sequences:

>Translated_177_residues
MTIVRIPLDVICVKTGVLCPSCQRKVDEGIVKPIEVDIMRVLLNLENEIKELRNATYEKTYQVDNTLIVVIKVDKASNEL
AKKIRQALVKELGRDYRIRVLLKSEEDPRQLVSQLLIPLTVKGINIMWLPDGTQKYVVNVRGPLRRLAIPKEQVEKILEE
ILGAPVEIRVETPRRSF
>Mature_176_residues
TIVRIPLDVICVKTGVLCPSCQRKVDEGIVKPIEVDIMRVLLNLENEIKELRNATYEKTYQVDNTLIVVIKVDKASNELA
KKIRQALVKELGRDYRIRVLLKSEEDPRQLVSQLLIPLTVKGINIMWLPDGTQKYVVNVRGPLRRLAIPKEQVEKILEEI
LGAPVEIRVETPRRSF

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20290; Mature: 20159

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVRIPLDVICVKTGVLCPSCQRKVDEGIVKPIEVDIMRVLLNLENEIKELRNATYEKT
CEEEECCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHE
YQVDNTLIVVIKVDKASNELAKKIRQALVKELGRDYRIRVLLKSEEDPRQLVSQLLIPLT
EEECCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHEE
VKGINIMWLPDGTQKYVVNVRGPLRRLAIPKEQVEKILEEILGAPVEIRVETPRRSF
ECCEEEEECCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure 
TIVRIPLDVICVKTGVLCPSCQRKVDEGIVKPIEVDIMRVLLNLENEIKELRNATYEKT
EEEECCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHE
YQVDNTLIVVIKVDKASNELAKKIRQALVKELGRDYRIRVLLKSEEDPRQLVSQLLIPLT
EEECCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHEE
VKGINIMWLPDGTQKYVVNVRGPLRRLAIPKEQVEKILEEILGAPVEIRVETPRRSF
ECCEEEEECCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA