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Identifier: 15679323

GI number: 15679323

Start: 1194014

End: 1194304

Strand: Direct

Name: Not Available

Synonym: MTH1323

Alternate gene names: 15679323

Gene position: 1194014-1194304 (Clockwise)

Preceding gene: 15679322

Following gene: 15679324

Centisome position: 68.18

GC content: 48.11

Gene sequence:

>291_bases
ATGAGAAGATCAAGAGGTTTCAGAAGTAAAACAAGACACAAGCTTCAGAAGGTTAAAAGGCCAGGCAGGTCCAACCCCAT
AACAAGGAAGATCCAGAGCTTCAATGAGGGTGACCTTGTACACATCATCATCGACCCTAGCATTCACAGGGGCCAGCCAC
ACCCGCGTTTCCATGGTAAAACCGGTCGAGTTGTGGGGATGATGGGTAAATCCTATGTTGTTGCCCTGAAGGATGGTAAC
AAGGATAAACAGCTTGTTGTGAGGCCAGAGCACCTTCAGATGCAAGAGTGA

Upstream 100 bases:

>100_bases
GGAGATATTAAATAGAGAACTTATAAGTTTAGATATCTGATTCTTGTAAAGTTTTAGTGACTGTTACAAGCCATTGAAGG
CTTTTTATGGAGGTTAAAGA

Downstream 100 bases:

>100_bases
TTCCCATGATCGGGAAAAAGGTTCTGGAAAGTGAACCTGTTTCTATGGCAGAGGTTAAGGAAATCCTTGAAAAATTTGGG
GAAGACCATGAACTCACATA

Product: 50S ribosomal protein L21e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKDGN
KDKQLVVRPEHLQMQE

Sequences:

>Translated_96_residues
MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKDGN
KDKQLVVRPEHLQMQE
>Mature_96_residues
MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKDGN
KDKQLVVRPEHLQMQE

Specific function: Unknown

COG id: COG2139

COG function: function code J; Ribosomal protein L21E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L21e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL21_METTH (O27378)

Other databases:

- EMBL:   AE000666
- PIR:   H69042
- RefSeq:   NP_276440.1
- ProteinModelPortal:   O27378
- SMR:   O27378
- STRING:   O27378
- GeneID:   1471040
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1323
- NMPDR:   fig|187420.1.peg.1295
- eggNOG:   arNOG13006
- HOGENOM:   HBG497499
- OMA:   RFHGKTG
- PhylomeDB:   O27378
- ProtClustDB:   PRK04306
- BioCyc:   MTHE187420:MTH1323-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00369
- InterPro:   IPR001147
- InterPro:   IPR022856
- InterPro:   IPR018259
- InterPro:   IPR008991

Pfam domain/function: PF01157 Ribosomal_L21e; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 11116; Mature: 11116

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: PS01171 RIBOSOMAL_L21E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGK
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC
TGRVVGMMGKSYVVALKDGNKDKQLVVRPEHLQMQE
CCCEEEECCCEEEEEECCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGK
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC
TGRVVGMMGKSYVVALKDGNKDKQLVVRPEHLQMQE
CCCEEEECCCEEEEEECCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463