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Identifier: 15679324

GI number: 15679324

Start: 1194301

End: 1194651

Strand: Direct

Name: Not Available

Synonym: MTH1324

Alternate gene names: NA

Gene position: 1194301-1194651 (Clockwise)

Preceding gene: 15679323

Following gene: 15679325

Centisome position: 68.19

GC content: 45.58

Gene sequence:

>351_bases
GTGATTCCCATGATCGGGAAAAAGGTTCTGGAAAGTGAACCTGTTTCTATGGCAGAGGTTAAGGAAATCCTTGAAAAATT
TGGGGAAGACCATGAACTCACATACGAGCAGAACCTTGTCCTTGACCATGTAACCCGTTTTTCAAGGCTTGACCCTGAAA
AGAGCAGGGAGCTGGTGGAGGAACTGATGGACATCCCCAACATCAAAAGGAGGCATGCTGTTAAAATTGCAGATATAATG
CCGGTGGACATATCCGACCTCCGTTTAATCTTTGCCAAGGAGAGGGTTCCCATAAAGGCTGATGACCTTCCAGGCATACT
CGAGGTAATAGATAAATACCGGGTCGAATAA

Upstream 100 bases:

>100_bases
GAGTTGTGGGGATGATGGGTAAATCCTATGTTGTTGCCCTGAAGGATGGTAACAAGGATAAACAGCTTGTTGTGAGGCCA
GAGCACCTTCAGATGCAAGA

Downstream 100 bases:

>100_bases
AAATAATATCTGACCTGAAAAAAGTAGAGTATGTGATTTCATGGAAGAATACGCTATCATACTGGATTACCTTCCACTTG
GTTACATGAGCGAAGGGTTC

Product: hypothetical protein

Products: diphosphate; RNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIPMIGKKVLESEPVSMAEVKEILEKFGEDHELTYEQNLVLDHVTRFSRLDPEKSRELVEELMDIPNIKRRHAVKIADIM
PVDISDLRLIFAKERVPIKADDLPGILEVIDKYRVE

Sequences:

>Translated_116_residues
MIPMIGKKVLESEPVSMAEVKEILEKFGEDHELTYEQNLVLDHVTRFSRLDPEKSRELVEELMDIPNIKRRHAVKIADIM
PVDISDLRLIFAKERVPIKADDLPGILEVIDKYRVE
>Mature_116_residues
MIPMIGKKVLESEPVSMAEVKEILEKFGEDHELTYEQNLVLDHVTRFSRLDPEKSRELVEELMDIPNIKRRHAVKIADIM
PVDISDLRLIFAKERVPIKADDLPGILEVIDKYRVE

Specific function: Unknown

COG id: COG1460

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010997
- InterPro:   IPR015906
- InterPro:   IPR015907
- InterPro:   IPR005574 [H]

Pfam domain/function: PF03874 RNA_pol_Rpb4 [H]

EC number: 2.7.7.6

Molecular weight: Translated: 13479; Mature: 13479

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPMIGKKVLESEPVSMAEVKEILEKFGEDHELTYEQNLVLDHVTRFSRLDPEKSRELVE
CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
ELMDIPNIKRRHAVKIADIMPVDISDLRLIFAKERVPIKADDLPGILEVIDKYRVE
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIPMIGKKVLESEPVSMAEVKEILEKFGEDHELTYEQNLVLDHVTRFSRLDPEKSRELVE
CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
ELMDIPNIKRRHAVKIADIMPVDISDLRLIFAKERVPIKADDLPGILEVIDKYRVE
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]