| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678893
GI number: 15678893
Start: 793775
End: 795094
Strand: Direct
Name: Not Available
Synonym: MTH873
Alternate gene names: NA
Gene position: 793775-795094 (Clockwise)
Preceding gene: 15678892
Following gene: 15678894
Centisome position: 45.32
GC content: 53.56
Gene sequence:
>1320_bases GTGTCCATGAAATTTAACATTTCAAGGCCCCTCGTGACTGACCTCACACATGGCGGTGTCACCATTGCCCTGGAGATGAG GAAACACTTCCCTGAGGTCATGGCGTGGGACTTTTACGGCACACTCGGTGATGATGACCGTGAAATGCTCATTGAAAAAG GGGTTGATGTTGTTGAAGGACCTGTCAGTGGCTCCACAGTAATAGCACCGGTCCACTGCCCGGTCAGATCAGATTTAACC CATCATGAGATAACCGGCTGGCTCCTGGGATCCTGGAGGAGGGAGAAGGGTGTGCCGGTGGTGGAGGTGACCGGTGTTAA GGGAAAAACCAGCACCGTATGGATACTCAGGAGCATCATGGGAGACCTTGAACCCCTGGTCCTCAGCAGTCTTGGATCCT GGGCCGGTGATGAACTCCTGCGGCGGGATATAAGCATAGCACCTGCCAGCATAATTGAGACCGTGAACCTTGCAGAGCAC CATGATTACGGTGCAGCCATCTTCGAGGTCTCCCTGGGTGGGACCGGCCTGGCAGATGTGGGGGTTCTAACAAACATAGC CGAGGACTACGGGATAAGGAGGGGTACCTCAAGGGCCAGCAGGGCAAAGGAGCAGATATTCAGAAGCCGGCTGGTCTGCT GCGAATACAGGGCCTTCTGGAGGCACTACAGCAGATTCCAGGAGAGGACAAACACCTTCTCAGTGAGGGACACTGAGGCC ACACTCCACGTGGATGATGTGAACTACGGCCTTGAGTCAACAGAGGCCACACTAGATGCCACCGGGCTTAAAACCCTTGC CGGGGACCATCTGGATGCAGAATTCCGGATTGAAACCTTTGCACCTGCAGAACACCAGCTCTCCAATGTCCTTGCAGCTG CAAGCGCCGCCCTGACCCTCGGGTTTGATGTTGAGGATGTTCAGAGGGGTGTTAAGGACTACCATGGAATTCCAGGAAGG ACCTCCATGAGACAGCTCAAGGGCACCACCATAATAGAGGAGATAAACCCGGGGCTCAACGTGCGGGCCATAGAGTACAC CCTGAAAATGGCCATGGAACTTCCAGATCCCATCATCATACTCGGGGGAAGGTACGGGGTTACCTGTGAGGAGATAGATG AGGCCCGCCTCTCCGAGACACTCAGCAATTATGACCTTAAGTTCATATTCACCGATGAACTGGGGTACAGTATCATGAGG AGATCCGGCATGGATGGCATCTACTTTAAAAACCCGGAGGATGCCCTCAGGGTCGGGCTAAATCATCGTACAGTCGTTCT CATTTACCGCTCAGAGTATGGTGACCTTACAAAAAGGTAA
Upstream 100 bases:
>100_bases AACGAAAGGCCCACTTCGTGAGGCTCAGCAAGGATTTCTACAGGAAGGTCCGTGAAAAACTCATAGAGGGCGGAATAGAC TCTATAAAGGGTTAAAGGTT
Downstream 100 bases:
>100_bases AAACCGGTGGTAGCCATAATTATGTGATTTTTAATAAACTGGAGTTTTTGAAAAGTTATATAATAGGATACAATAAATTT CTCAAATGATTAACGTTTAC
Product: UDP-N-acetylmuramyl tripeptide synthetase related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSMKFNISRPLVTDLTHGGVTIALEMRKHFPEVMAWDFYGTLGDDDREMLIEKGVDVVEGPVSGSTVIAPVHCPVRSDLT HHEITGWLLGSWRREKGVPVVEVTGVKGKTSTVWILRSIMGDLEPLVLSSLGSWAGDELLRRDISIAPASIIETVNLAEH HDYGAAIFEVSLGGTGLADVGVLTNIAEDYGIRRGTSRASRAKEQIFRSRLVCCEYRAFWRHYSRFQERTNTFSVRDTEA TLHVDDVNYGLESTEATLDATGLKTLAGDHLDAEFRIETFAPAEHQLSNVLAAASAALTLGFDVEDVQRGVKDYHGIPGR TSMRQLKGTTIIEEINPGLNVRAIEYTLKMAMELPDPIIILGGRYGVTCEEIDEARLSETLSNYDLKFIFTDELGYSIMR RSGMDGIYFKNPEDALRVGLNHRTVVLIYRSEYGDLTKR
Sequences:
>Translated_439_residues MSMKFNISRPLVTDLTHGGVTIALEMRKHFPEVMAWDFYGTLGDDDREMLIEKGVDVVEGPVSGSTVIAPVHCPVRSDLT HHEITGWLLGSWRREKGVPVVEVTGVKGKTSTVWILRSIMGDLEPLVLSSLGSWAGDELLRRDISIAPASIIETVNLAEH HDYGAAIFEVSLGGTGLADVGVLTNIAEDYGIRRGTSRASRAKEQIFRSRLVCCEYRAFWRHYSRFQERTNTFSVRDTEA TLHVDDVNYGLESTEATLDATGLKTLAGDHLDAEFRIETFAPAEHQLSNVLAAASAALTLGFDVEDVQRGVKDYHGIPGR TSMRQLKGTTIIEEINPGLNVRAIEYTLKMAMELPDPIIILGGRYGVTCEEIDEARLSETLSNYDLKFIFTDELGYSIMR RSGMDGIYFKNPEDALRVGLNHRTVVLIYRSEYGDLTKR >Mature_438_residues SMKFNISRPLVTDLTHGGVTIALEMRKHFPEVMAWDFYGTLGDDDREMLIEKGVDVVEGPVSGSTVIAPVHCPVRSDLTH HEITGWLLGSWRREKGVPVVEVTGVKGKTSTVWILRSIMGDLEPLVLSSLGSWAGDELLRRDISIAPASIIETVNLAEHH DYGAAIFEVSLGGTGLADVGVLTNIAEDYGIRRGTSRASRAKEQIFRSRLVCCEYRAFWRHYSRFQERTNTFSVRDTEAT LHVDDVNYGLESTEATLDATGLKTLAGDHLDAEFRIETFAPAEHQLSNVLAAASAALTLGFDVEDVQRGVKDYHGIPGRT SMRQLKGTTIIEEINPGLNVRAIEYTLKMAMELPDPIIILGGRYGVTCEEIDEARLSETLSNYDLKFIFTDELGYSIMRR SGMDGIYFKNPEDALRVGLNHRTVVLIYRSEYGDLTKR
Specific function: Unknown
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: NA
Molecular weight: Translated: 48830; Mature: 48699
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKFNISRPLVTDLTHGGVTIALEMRKHFPEVMAWDFYGTLGDDDREMLIEKGVDVVEG CCEEECCCCCHHHHCCCCCEEEEEEHHHCCCHHEEEECCCCCCCCHHHHHHHCCCCEEEC PVSGSTVIAPVHCPVRSDLTHHEITGWLLGSWRREKGVPVVEVTGVKGKTSTVWILRSIM CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHHCCCCEEEEECCCCCCHHHHHHHHHH GDLEPLVLSSLGSWAGDELLRRDISIAPASIIETVNLAEHHDYGAAIFEVSLGGTGLADV CCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHH GVLTNIAEDYGIRRGTSRASRAKEQIFRSRLVCCEYRAFWRHYSRFQERTNTFSVRDTEA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCE TLHVDDVNYGLESTEATLDATGLKTLAGDHLDAEFRIETFAPAEHQLSNVLAAASAALTL EEEEECCCCCCCCCCCEECCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEE GFDVEDVQRGVKDYHGIPGRTSMRQLKGTTIIEEINPGLNVRAIEYTLKMAMELPDPIII CCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEHHCCCCCCEEEHHHHHHHHHHCCCCEEE LGGRYGVTCEEIDEARLSETLSNYDLKFIFTDELGYSIMRRSGMDGIYFKNPEDALRVGL ECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEECCCHHHHHCCC NHRTVVLIYRSEYGDLTKR CCCEEEEEEECCCCCCCCC >Mature Secondary Structure SMKFNISRPLVTDLTHGGVTIALEMRKHFPEVMAWDFYGTLGDDDREMLIEKGVDVVEG CEEECCCCCHHHHCCCCCEEEEEEHHHCCCHHEEEECCCCCCCCHHHHHHHCCCCEEEC PVSGSTVIAPVHCPVRSDLTHHEITGWLLGSWRREKGVPVVEVTGVKGKTSTVWILRSIM CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHHCCCCEEEEECCCCCCHHHHHHHHHH GDLEPLVLSSLGSWAGDELLRRDISIAPASIIETVNLAEHHDYGAAIFEVSLGGTGLADV CCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHH GVLTNIAEDYGIRRGTSRASRAKEQIFRSRLVCCEYRAFWRHYSRFQERTNTFSVRDTEA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCE TLHVDDVNYGLESTEATLDATGLKTLAGDHLDAEFRIETFAPAEHQLSNVLAAASAALTL EEEEECCCCCCCCCCCEECCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEE GFDVEDVQRGVKDYHGIPGRTSMRQLKGTTIIEEINPGLNVRAIEYTLKMAMELPDPIII CCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEHHCCCCCCEEEHHHHHHHHHHCCCCEEE LGGRYGVTCEEIDEARLSETLSNYDLKFIFTDELGYSIMRRSGMDGIYFKNPEDALRVGL ECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEECCCHHHHHCCC NHRTVVLIYRSEYGDLTKR CCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]