| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is pip
Identifier: 15673652
GI number: 15673652
Start: 1718713
End: 1721418
Strand: Reverse
Name: pip
Synonym: L118462
Alternate gene names: 15673652
Gene position: 1721418-1718713 (Counterclockwise)
Preceding gene: 15673653
Following gene: 15673651
Centisome position: 72.77
GC content: 34.74
Gene sequence:
>2706_bases GTGAAAAGTATTAAAAATACATGGAAGTTGTTTGCCCTAGACTGGAAGCGAATATTTAAAAATCCCGTGGCGACTTTTTT AATTGTCGCCCTAATGATAATTCCCTCTTTATATGCTTGGTTTAATATTAAAGCCCTGTGGGACCCCTATGCCAATACTT CGCAACTGCCAATTGCGGTCTATAGTGCAGATAAATCTGCAAGTTTTCAAGATAAAACCATCAATATTGGTGATGAAGTA CTGAAAAATTTAAAGAAAAATCACCAATTAGGCTGGAAATTTGTTGATTCCAAAGCAGATTTAGATAAAGGTGTGAAATC TGGAAAATACTATGCTGGAATCTATTTACCAAAGGATTTTTCAAAAGACCTCTTAAGTTTCACCACGGGAGATATTAAAA AACCACAAATTGTTTATTCAATTAACGAAAAAATCAATGCCATCGCTCCCAAAATAACATCAAAAGGAGCCTCTTCTCTA CAATCGCAAATTTCTGAAGAGTTTATCAAAACGGCAAGTAGTACCCTTTTAAAAACCTTCAATACAATTGGTTACGATAT TGATAAAAACATGGTAAGTATTCAGAAGGTTAAATCAGCGATTTTATCAACTAATGATAATTTAGGAACCATTGATAAAT ACACTCAACAAGTTGTTGATCTTCATGGAAAAATGCCAGAAATTAAAGAAAAACTGGCAAAAGCTAATGAATTTATCACT TATTTACCAGAAGTAGATGCTTTAGGTCAAAAGGTCATTAAATTAAATGATAAAATGCCAGAAATTGATAAAAGTTTTTC ACTCGTTTTGACCCTTCAAGAGAAAATACCTGAGATTCAAAATGCTGGAAAACAAATCTCGATGATTGATGATGACTTTG CGTCAGTAGAAAGTACCATGACTCAAGGCATTCAAGAAGCCAAACAAGGTTTACAAATTATCAATCAAGTCCAAAAATCA ATGCCAGACATTAAAAAATTGGGACAAGATGCTGATAGTTTGGGGACTATAACCTTGGATGCGGCGAAAAAAATGCAGAG TGCGTTGCCTAGCATTACAAATAGCGTTCAAATAACACTTCAATCAATTCAAGAGTTCTCAAAAAATACTTCATCCGTTA TTTCTGTTATTGACCAAGCGATTGCCGATAATCAATTAACTGATGATGAAAAGGAACAAATAAATAGCTTAATTACCAAT TTTACTAATAACATTGCTAAACAAAGAGAAGCCATTCAAAATATTGTTGAATATATGAAGCAGGTGCAAGAAAGCAATGG AAATCACGATTTAGATTCTACTATTGAGCAATTAACTAATCTAGATTCGCTCTTGTCAGAACTTAGTACCAGAATGAGTC ACCTAAATGACTTAGTGCAAGAGGGTGATGTAACTAAGATTCGAGCTTATCTATCACAAATCAATGATGTAGTAAATAAT ATTTCTGATTTAATTAATAAAATTGATGTCAGTGAGATTAGTAGTACAATTAATAAAGCTCTAACAACATTAATTAATAC CATAACAGACGCTAAAGGTTTATTAAATCAAGCTCAACAAATCGACTTTGATGCCTTACTAAATTCAACAAGCCAAACAG TTTCTAATGCTATTACCATTTTAGAAAAATATCAAGGCGAAATGCCAGCCATTAAACAAGAAATTCATGATGCGAATGTG ATGTTAAATGGCAATATGACAACTATTGTTAATGCAATCAATGAGGGAGCTAATCTCTATAAAAATGAGTTTCCTACTCT TAAAAGTAAGTTAGGGACAGCTTCTGATTTCTTTAAAAATGATTATGCTGGTGTTCGTAAAGATTTGACAGATACCTTAA CAATGGCAAATGATAAAATGCCTGATGTTGAGTCTGCTTTGAATCAAGCCAATGATTTAATCCAAAATGATTGGCCTGAA ATCAAATCAGGAATTCAAAAAGCAGCCGCAGCTATTCAAAAAGGTGAAAAAGAAGTTGACTTAGGTGAAATCGTCAAACT CCTAAAATTAGATGCGACCAAAGAGAGCGACTTCCTGACACAACCAGTTGAAGTCCAAGAAAATCAAATCTACCCGATTG CCAACAATGGTTCAGCAAGTACACCTTTCTATACTGCGCTTTGTCTGTGGGTCGGTGCAGTCTTACTTTCAAGTTTGGCA ACAACGGAGGTTCACTTATCAGATAAAGATAAAAAACGTTATTCTAAACGTGAACAATTCTTTGCTCGAATGGGAAGTTT CGTAGCCATTGGACTTGCTCAAGCCTTGATTGTAACGCTTGGAAATTATTTTGGTTTAGGAGTAGATGTAAGAGATCCAT TCTACAGTGTTCTCTTTGCCTTACTAATATCCATAGCCTTTATGATAATGGTTTATGTTCTGGTCGCACTGTTTGGCAAT GTAGGTAAAGGAATAGCGATTATCATCCTGGTTCTTTCCATTTCTGGTGGTGGTGGGAACTATCCAATCCAAGTTTCTGG AAAATTCTTCCAAGCCATTAATCCTTATTTACCATTTACTCATGCTGTCAACCTTTTACGAGAATCAGCGGGAGGAATTT ACTGGCCAAATGCTTGGTTTGCGATAATCATTCTTGTAGCAGTGTCAATTGTGTTTGTTGCAATAGGTGCCTTCCTCTTC CCACACTTTGAAGATAAAACGAAGAAAATTTCCGAGATCGGAAGCAAGAGTCATTTCTTCCATTAA
Upstream 100 bases:
>100_bases CGTAATTTTTAAATCCGCAGTCATGAAGTATGAAAAAGCCTCGATGATATTTAAGAAATTTAAAAAGTTACAAGTGAGAT AAGAATGATGAGGATAAGAA
Downstream 100 bases:
>100_bases TGTTAAGAAAACTACTGACAGACTGGTCAGTAGTTTTTCTATCATTTATAATCATAATGAGCAAATAGTAAGGGAGAACT TGTGCTATAATATGTCTATG
Product: phage infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MKSIKNTWKLFALDWKRIFKNPVATFLIVALMIIPSLYAWFNIKALWDPYANTSQLPIAVYSADKSASFQDKTINIGDEV LKNLKKNHQLGWKFVDSKADLDKGVKSGKYYAGIYLPKDFSKDLLSFTTGDIKKPQIVYSINEKINAIAPKITSKGASSL QSQISEEFIKTASSTLLKTFNTIGYDIDKNMVSIQKVKSAILSTNDNLGTIDKYTQQVVDLHGKMPEIKEKLAKANEFIT YLPEVDALGQKVIKLNDKMPEIDKSFSLVLTLQEKIPEIQNAGKQISMIDDDFASVESTMTQGIQEAKQGLQIINQVQKS MPDIKKLGQDADSLGTITLDAAKKMQSALPSITNSVQITLQSIQEFSKNTSSVISVIDQAIADNQLTDDEKEQINSLITN FTNNIAKQREAIQNIVEYMKQVQESNGNHDLDSTIEQLTNLDSLLSELSTRMSHLNDLVQEGDVTKIRAYLSQINDVVNN ISDLINKIDVSEISSTINKALTTLINTITDAKGLLNQAQQIDFDALLNSTSQTVSNAITILEKYQGEMPAIKQEIHDANV MLNGNMTTIVNAINEGANLYKNEFPTLKSKLGTASDFFKNDYAGVRKDLTDTLTMANDKMPDVESALNQANDLIQNDWPE IKSGIQKAAAAIQKGEKEVDLGEIVKLLKLDATKESDFLTQPVEVQENQIYPIANNGSASTPFYTALCLWVGAVLLSSLA TTEVHLSDKDKKRYSKREQFFARMGSFVAIGLAQALIVTLGNYFGLGVDVRDPFYSVLFALLISIAFMIMVYVLVALFGN VGKGIAIIILVLSISGGGGNYPIQVSGKFFQAINPYLPFTHAVNLLRESAGGIYWPNAWFAIIILVAVSIVFVAIGAFLF PHFEDKTKKISEIGSKSHFFH
Sequences:
>Translated_901_residues MKSIKNTWKLFALDWKRIFKNPVATFLIVALMIIPSLYAWFNIKALWDPYANTSQLPIAVYSADKSASFQDKTINIGDEV LKNLKKNHQLGWKFVDSKADLDKGVKSGKYYAGIYLPKDFSKDLLSFTTGDIKKPQIVYSINEKINAIAPKITSKGASSL QSQISEEFIKTASSTLLKTFNTIGYDIDKNMVSIQKVKSAILSTNDNLGTIDKYTQQVVDLHGKMPEIKEKLAKANEFIT YLPEVDALGQKVIKLNDKMPEIDKSFSLVLTLQEKIPEIQNAGKQISMIDDDFASVESTMTQGIQEAKQGLQIINQVQKS MPDIKKLGQDADSLGTITLDAAKKMQSALPSITNSVQITLQSIQEFSKNTSSVISVIDQAIADNQLTDDEKEQINSLITN FTNNIAKQREAIQNIVEYMKQVQESNGNHDLDSTIEQLTNLDSLLSELSTRMSHLNDLVQEGDVTKIRAYLSQINDVVNN ISDLINKIDVSEISSTINKALTTLINTITDAKGLLNQAQQIDFDALLNSTSQTVSNAITILEKYQGEMPAIKQEIHDANV MLNGNMTTIVNAINEGANLYKNEFPTLKSKLGTASDFFKNDYAGVRKDLTDTLTMANDKMPDVESALNQANDLIQNDWPE IKSGIQKAAAAIQKGEKEVDLGEIVKLLKLDATKESDFLTQPVEVQENQIYPIANNGSASTPFYTALCLWVGAVLLSSLA TTEVHLSDKDKKRYSKREQFFARMGSFVAIGLAQALIVTLGNYFGLGVDVRDPFYSVLFALLISIAFMIMVYVLVALFGN VGKGIAIIILVLSISGGGGNYPIQVSGKFFQAINPYLPFTHAVNLLRESAGGIYWPNAWFAIIILVAVSIVFVAIGAFLF PHFEDKTKKISEIGSKSHFFH >Mature_901_residues MKSIKNTWKLFALDWKRIFKNPVATFLIVALMIIPSLYAWFNIKALWDPYANTSQLPIAVYSADKSASFQDKTINIGDEV LKNLKKNHQLGWKFVDSKADLDKGVKSGKYYAGIYLPKDFSKDLLSFTTGDIKKPQIVYSINEKINAIAPKITSKGASSL QSQISEEFIKTASSTLLKTFNTIGYDIDKNMVSIQKVKSAILSTNDNLGTIDKYTQQVVDLHGKMPEIKEKLAKANEFIT YLPEVDALGQKVIKLNDKMPEIDKSFSLVLTLQEKIPEIQNAGKQISMIDDDFASVESTMTQGIQEAKQGLQIINQVQKS MPDIKKLGQDADSLGTITLDAAKKMQSALPSITNSVQITLQSIQEFSKNTSSVISVIDQAIADNQLTDDEKEQINSLITN FTNNIAKQREAIQNIVEYMKQVQESNGNHDLDSTIEQLTNLDSLLSELSTRMSHLNDLVQEGDVTKIRAYLSQINDVVNN ISDLINKIDVSEISSTINKALTTLINTITDAKGLLNQAQQIDFDALLNSTSQTVSNAITILEKYQGEMPAIKQEIHDANV MLNGNMTTIVNAINEGANLYKNEFPTLKSKLGTASDFFKNDYAGVRKDLTDTLTMANDKMPDVESALNQANDLIQNDWPE IKSGIQKAAAAIQKGEKEVDLGEIVKLLKLDATKESDFLTQPVEVQENQIYPIANNGSASTPFYTALCLWVGAVLLSSLA TTEVHLSDKDKKRYSKREQFFARMGSFVAIGLAQALIVTLGNYFGLGVDVRDPFYSVLFALLISIAFMIMVYVLVALFGN VGKGIAIIILVLSISGGGGNYPIQVSGKFFQAINPYLPFTHAVNLLRESAGGIYWPNAWFAIIILVAVSIVFVAIGAFLF PHFEDKTKKISEIGSKSHFFH
Specific function: Required for phage infection [H]
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 99621; Mature: 99621
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIKNTWKLFALDWKRIFKNPVATFLIVALMIIPSLYAWFNIKALWDPYANTSQLPIAV CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE YSADKSASFQDKTINIGDEVLKNLKKNHQLGWKFVDSKADLDKGVKSGKYYAGIYLPKDF EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCEEEEEECCCHH SKDLLSFTTGDIKKPQIVYSINEKINAIAPKITSKGASSLQSQISEEFIKTASSTLLKTF HHHHHHHHCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTIGYDIDKNMVSIQKVKSAILSTNDNLGTIDKYTQQVVDLHGKMPEIKEKLAKANEFIT HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YLPEVDALGQKVIKLNDKMPEIDKSFSLVLTLQEKIPEIQNAGKQISMIDDDFASVESTM HCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCCHHHCCCCEEEECCHHHHHHHHHH TQGIQEAKQGLQIINQVQKSMPDIKKLGQDADSLGTITLDAAKKMQSALPSITNSVQITL HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHCCCEEHHHHHHHHHHHHHHHHHHHHHH QSIQEFSKNTSSVISVIDQAIADNQLTDDEKEQINSLITNFTNNIAKQREAIQNIVEYMK HHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVQESNGNHDLDSTIEQLTNLDSLLSELSTRMSHLNDLVQEGDVTKIRAYLSQINDVVNN HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ISDLINKIDVSEISSTINKALTTLINTITDAKGLLNQAQQIDFDALLNSTSQTVSNAITI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LEKYQGEMPAIKQEIHDANVMLNGNMTTIVNAINEGANLYKNEFPTLKSKLGTASDFFKN HHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH DYAGVRKDLTDTLTMANDKMPDVESALNQANDLIQNDWPEIKSGIQKAAAAIQKGEKEVD HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC LGEIVKLLKLDATKESDFLTQPVEVQENQIYPIANNGSASTPFYTALCLWVGAVLLSSLA HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH TTEVHLSDKDKKRYSKREQFFARMGSFVAIGLAQALIVTLGNYFGLGVDVRDPFYSVLFA HHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LLISIAFMIMVYVLVALFGNVGKGIAIIILVLSISGGGGNYPIQVSGKFFQAINPYLPFT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCEEECCHHHHHCCCCCCHH HAVNLLRESAGGIYWPNAWFAIIILVAVSIVFVAIGAFLFPHFEDKTKKISEIGSKSHFF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC H C >Mature Secondary Structure MKSIKNTWKLFALDWKRIFKNPVATFLIVALMIIPSLYAWFNIKALWDPYANTSQLPIAV CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE YSADKSASFQDKTINIGDEVLKNLKKNHQLGWKFVDSKADLDKGVKSGKYYAGIYLPKDF EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCEEEEEECCCHH SKDLLSFTTGDIKKPQIVYSINEKINAIAPKITSKGASSLQSQISEEFIKTASSTLLKTF HHHHHHHHCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTIGYDIDKNMVSIQKVKSAILSTNDNLGTIDKYTQQVVDLHGKMPEIKEKLAKANEFIT HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YLPEVDALGQKVIKLNDKMPEIDKSFSLVLTLQEKIPEIQNAGKQISMIDDDFASVESTM HCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCCHHHCCCCEEEECCHHHHHHHHHH TQGIQEAKQGLQIINQVQKSMPDIKKLGQDADSLGTITLDAAKKMQSALPSITNSVQITL HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHCCCEEHHHHHHHHHHHHHHHHHHHHHH QSIQEFSKNTSSVISVIDQAIADNQLTDDEKEQINSLITNFTNNIAKQREAIQNIVEYMK HHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVQESNGNHDLDSTIEQLTNLDSLLSELSTRMSHLNDLVQEGDVTKIRAYLSQINDVVNN HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ISDLINKIDVSEISSTINKALTTLINTITDAKGLLNQAQQIDFDALLNSTSQTVSNAITI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LEKYQGEMPAIKQEIHDANVMLNGNMTTIVNAINEGANLYKNEFPTLKSKLGTASDFFKN HHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH DYAGVRKDLTDTLTMANDKMPDVESALNQANDLIQNDWPEIKSGIQKAAAAIQKGEKEVD HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC LGEIVKLLKLDATKESDFLTQPVEVQENQIYPIANNGSASTPFYTALCLWVGAVLLSSLA HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH TTEVHLSDKDKKRYSKREQFFARMGSFVAIGLAQALIVTLGNYFGLGVDVRDPFYSVLFA HHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LLISIAFMIMVYVLVALFGNVGKGIAIIILVLSISGGGGNYPIQVSGKFFQAINPYLPFT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCEEECCHHHHHCCCCCCHH HAVNLLRESAGGIYWPNAWFAIIILVAVSIVFVAIGAFLFPHFEDKTKKISEIGSKSHFF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8366036 [H]