Click here to switch to the map view.

The map label for this gene is yrbI

Identifier: 15673651

GI number: 15673651

Start: 1717007

End: 1717840

Strand: Reverse

Name: yrbI

Synonym: L116756

Alternate gene names: 15673651

Gene position: 1717840-1717007 (Counterclockwise)

Preceding gene: 15673652

Following gene: 15673650

Centisome position: 72.62

GC content: 33.33

Gene sequence:

>834_bases
ATGCCTTATAAACGTTATGGGGAAATTTTTAAAAAACTACGAGAACAAAAGAATTTTTCGCTTTCTCATTTTTCAGAAAT
AGGTATTTCAAAAGCGAGTTTATCAAGATTTGAATTAGGTCAAACCATGATAAGCTTTGAGCGCTTGGATAGTGCGCTGC
AAGAGATGAATGTGACTTTAGCTGAGTATGAACATTTTATCAATAATTTTTCAATGGATTATAAAGAAGAATTTTTAGAA
GATATAATTCTTGCGGATATTGCAGATGACGTCGATAAACTTCATAGTCTCTATTTAGAAGCTATGGAATATGATTCAAA
AATGCTAGCTTATTGTGCTAAAAGTCGGTATGAAACACTGACACAAATGGAAGCTGACGATGTGGTTGAATATCTCTATG
ACGTTGGAGAATGGGGCTATTTTGAACTTTCGATTTTTTATCTGACTTTGGATAGTTTCGGTGAACGAGAAATTATGTAT
TTGATGAAAGAACTCTGGGGGAAGAGTAAACACTTATATGGTGTTTTTAAATATCGCAGAAGAGTTCTTCAATCTTCGTA
TCGAGCGGTCGTTTTGCTTTCCTCAAAAGGAGCTCGTGACTCAGCTAGAAGTATCTTGCAAAAAAGTTACCCTAAAGATG
ATTTCTACGACCTCTATGTTGAAAATCTAAGAAATCTGGCACATGGTTTTTATAGCTATTGTTTCAAAGACAAGATAAGC
GGTGAAAAGCAAATCAAAAATGCCATTGAAATTTTTGGGCAAGTTGGATATGAAGATTTAGCAGATTATTATCAAAAACG
ATATCAAAAGCTTTTAGGAAAATTATTAACATAA

Upstream 100 bases:

>100_bases
TCGCAAGTCATTTTGCCACTAAATCCAAAAAACCTAAATCAAATATTCGTATTGGTAAAAAGTAATCGGTCAATAAAAAA
TAAAAATTTCGAGGAAAAAT

Downstream 100 bases:

>100_bases
AAAAGTCTCCAGATTATTTCGTTGCATTTTTGCAATGATTTAAAAAGGAGGTTTTTTTTTCTGCTAAAATAAAATTAAAG
ATAAAAGAAATCGAGCTTGA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTLAEYEHFINNFSMDYKEEFLE
DIILADIADDVDKLHSLYLEAMEYDSKMLAYCAKSRYETLTQMEADDVVEYLYDVGEWGYFELSIFYLTLDSFGEREIMY
LMKELWGKSKHLYGVFKYRRRVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDKIS
GEKQIKNAIEIFGQVGYEDLADYYQKRYQKLLGKLLT

Sequences:

>Translated_277_residues
MPYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTLAEYEHFINNFSMDYKEEFLE
DIILADIADDVDKLHSLYLEAMEYDSKMLAYCAKSRYETLTQMEADDVVEYLYDVGEWGYFELSIFYLTLDSFGEREIMY
LMKELWGKSKHLYGVFKYRRRVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDKIS
GEKQIKNAIEIFGQVGYEDLADYYQKRYQKLLGKLLT
>Mature_276_residues
PYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTLAEYEHFINNFSMDYKEEFLED
IILADIADDVDKLHSLYLEAMEYDSKMLAYCAKSRYETLTQMEADDVVEYLYDVGEWGYFELSIFYLTLDSFGEREIMYL
MKELWGKSKHLYGVFKYRRRVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDKISG
EKQIKNAIEIFGQVGYEDLADYYQKRYQKLLGKLLT

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 32805; Mature: 32674

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTL
CCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEYEHFINNFSMDYKEEFLEDIILADIADDVDKLHSLYLEAMEYDSKMLAYCAKSRYETL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQMEADDVVEYLYDVGEWGYFELSIFYLTLDSFGEREIMYLMKELWGKSKHLYGVFKYRR
HHCCHHHHHHHHHHCCCCCCEEHEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
RVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDKIS
HHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEKQIKNAIEIFGQVGYEDLADYYQKRYQKLLGKLLT
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTL
CHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEYEHFINNFSMDYKEEFLEDIILADIADDVDKLHSLYLEAMEYDSKMLAYCAKSRYETL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQMEADDVVEYLYDVGEWGYFELSIFYLTLDSFGEREIMYLMKELWGKSKHLYGVFKYRR
HHCCHHHHHHHHHHCCCCCCEEHEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
RVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDKIS
HHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEKQIKNAIEIFGQVGYEDLADYYQKRYQKLLGKLLT
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]