| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is arb
Identifier: 15673653
GI number: 15673653
Start: 1721677
End: 1723110
Strand: Reverse
Name: arb
Synonym: L121426
Alternate gene names: 15673653
Gene position: 1723110-1721677 (Counterclockwise)
Preceding gene: 15673654
Following gene: 15673652
Centisome position: 72.84
GC content: 37.17
Gene sequence:
>1434_bases ATGCCATTTAGTAAAGATTTTCTCTGGGGCGGAGCAACTGCAGCTAATCAATGTGAAGGCGGCTATAATCAGGGAGGACG GGGGCTTGCCAATGTCGACCTTGTTCCACACGGAAAAGACCGTTTTCCAATTATTACAGGGGAAATGAAGCACCTTGAAT TCGATGAAGAGCATTTTTATCCAGCAAAAGAAGCGATTGATATGTATCATCATTGGAAAGAAGACCTCGCACTTTTTGCT GAAATGGGATTTAAAACCTATCGAATGTCTATTGCTTGGACAAGAATTTTTCCAAAAGGCGACGAACAAGAGCCAAATGA AGAAGGCTTGCAATTTTATGAAGATATTTTTAGAGAATGCCAACGTTTAGGAATTGAACCCTTAGTAACCATCACTCACT TTGATTGTCCTGTCCACCTAATTAAAGAATACGGTGGCTGGCGTAATCGAAAAATGGTTGGTTTCTATGAAAATTTAGCC AGAGCAATTTTTACTCGTTATAAAGGATTAGTTCGCTATTGGTTGACATTTAATGAAATTAATATGCTCCTCCATGCTCC ATTTATGGGAGCAGGACTTGTTTTTGAAGAAGGAGAAAATAAAGAACAAGCCAAATACTTAGCCGCTCATCATGAACTAT TAGCATCGGCTTTAGCAACAAAAATTGGACATGAAGTTGACCCAGAAAATAAGATAGGCTGCATGTTAGCTGCTGGAGAT TACTATCCATTTGATTGTAATCCAGAAAATGTTTTTGAAGCTCAAAAACAAAATCATGATAATCTCTTTTTCATTGATGT TCAATCTCGTGGAAAATATCCAAACTACCTTTTAAAGAGATTAGAGCGTGAAGAAATTACACTTCCGATTGAAAAAGGCG ACTTAGAAATCCTTGCTGAAAACACAGTTGACTTTATTTCATTTAGTTACTATGCAAGTCGAGTCGCTAAAGTCAAGGAT GAGGATGCAGATAAATCAGCTGGAAATATCTTTGAATCTGTAAAAAATCCTTATTTAGAGGCCAGTGAATGGGGTTGGCA AATTGACCCACTTGGTTTAAGAATCACAATGAATTCTATTTATGACCGCTATCAAAAACCATTATTTATTGTAGAAAATG GTTTAGGAGCAGTAGATAAACCTGATGAAAATGGATTTGTAGCTGATGATTATCGAATTGATTACATGGCTGCACACATC AAAGAAATGAAGAAAGCAGTTGAACTTGATGGCGTTGAACTATTAGGTTATACTTCTTGGGGATGTATTGACTTAGTATC AGCAGGAACGGGTGAGATGAGCAAACGTTATGGATTCATCTATGTCGACCGAGACGATTATGGTAAAGGAAGTTTGAAAC GGACGCCTAAGAAATCATTTAACTGGTACAAGAAAGTTATTGCAAGCAACGGTGAAGATTTAACAAATGAATAA
Upstream 100 bases:
>100_bases AATTATAGAAAACGCTTCAAAAAATAGATGAGATCGCTATCAAATGTCATAAAAAAATGTTAAAATGAAAAAAAGAATAA AAAAAGGAGTGTCATCTATT
Downstream 100 bases:
>100_bases TTAAAAAGGGGGGCTTTCCTCCTTTTTTTATCAAACAAAACATTTCTTTGATTTAAGATTTTTATCTAGCAAGAAAAATT TACAATAGTTAAGCAAGTGT
Product: 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MPFSKDFLWGGATAANQCEGGYNQGGRGLANVDLVPHGKDRFPIITGEMKHLEFDEEHFYPAKEAIDMYHHWKEDLALFA EMGFKTYRMSIAWTRIFPKGDEQEPNEEGLQFYEDIFRECQRLGIEPLVTITHFDCPVHLIKEYGGWRNRKMVGFYENLA RAIFTRYKGLVRYWLTFNEINMLLHAPFMGAGLVFEEGENKEQAKYLAAHHELLASALATKIGHEVDPENKIGCMLAAGD YYPFDCNPENVFEAQKQNHDNLFFIDVQSRGKYPNYLLKRLEREEITLPIEKGDLEILAENTVDFISFSYYASRVAKVKD EDADKSAGNIFESVKNPYLEASEWGWQIDPLGLRITMNSIYDRYQKPLFIVENGLGAVDKPDENGFVADDYRIDYMAAHI KEMKKAVELDGVELLGYTSWGCIDLVSAGTGEMSKRYGFIYVDRDDYGKGSLKRTPKKSFNWYKKVIASNGEDLTNE
Sequences:
>Translated_477_residues MPFSKDFLWGGATAANQCEGGYNQGGRGLANVDLVPHGKDRFPIITGEMKHLEFDEEHFYPAKEAIDMYHHWKEDLALFA EMGFKTYRMSIAWTRIFPKGDEQEPNEEGLQFYEDIFRECQRLGIEPLVTITHFDCPVHLIKEYGGWRNRKMVGFYENLA RAIFTRYKGLVRYWLTFNEINMLLHAPFMGAGLVFEEGENKEQAKYLAAHHELLASALATKIGHEVDPENKIGCMLAAGD YYPFDCNPENVFEAQKQNHDNLFFIDVQSRGKYPNYLLKRLEREEITLPIEKGDLEILAENTVDFISFSYYASRVAKVKD EDADKSAGNIFESVKNPYLEASEWGWQIDPLGLRITMNSIYDRYQKPLFIVENGLGAVDKPDENGFVADDYRIDYMAAHI KEMKKAVELDGVELLGYTSWGCIDLVSAGTGEMSKRYGFIYVDRDDYGKGSLKRTPKKSFNWYKKVIASNGEDLTNE >Mature_476_residues PFSKDFLWGGATAANQCEGGYNQGGRGLANVDLVPHGKDRFPIITGEMKHLEFDEEHFYPAKEAIDMYHHWKEDLALFAE MGFKTYRMSIAWTRIFPKGDEQEPNEEGLQFYEDIFRECQRLGIEPLVTITHFDCPVHLIKEYGGWRNRKMVGFYENLAR AIFTRYKGLVRYWLTFNEINMLLHAPFMGAGLVFEEGENKEQAKYLAAHHELLASALATKIGHEVDPENKIGCMLAAGDY YPFDCNPENVFEAQKQNHDNLFFIDVQSRGKYPNYLLKRLEREEITLPIEKGDLEILAENTVDFISFSYYASRVAKVKDE DADKSAGNIFESVKNPYLEASEWGWQIDPLGLRITMNSIYDRYQKPLFIVENGLGAVDKPDENGFVADDYRIDYMAAHIK EMKKAVELDGVELLGYTSWGCIDLVSAGTGEMSKRYGFIYVDRDDYGKGSLKRTPKKSFNWYKKVIASNGEDLTNE
Specific function: Can hydrolyze salicin, cellobiose, and probably arbutin [H]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=491, Percent_Identity=28.3095723014257, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI110681710, Length=500, Percent_Identity=28, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI13273313, Length=494, Percent_Identity=27.1255060728745, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI24497614, Length=486, Percent_Identity=27.9835390946502, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI28376633, Length=488, Percent_Identity=26.844262295082, Blast_Score=139, Evalue=5e-33, Organism=Escherichia coli, GI1789070, Length=472, Percent_Identity=60.5932203389831, Blast_Score=629, Evalue=0.0, Organism=Escherichia coli, GI2367174, Length=481, Percent_Identity=53.4303534303534, Blast_Score=526, Evalue=1e-150, Organism=Escherichia coli, GI2367270, Length=473, Percent_Identity=52.6427061310782, Blast_Score=499, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17552856, Length=489, Percent_Identity=29.038854805726, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17539390, Length=488, Percent_Identity=28.8934426229508, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI21356577, Length=502, Percent_Identity=25.2988047808765, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 54772; Mature: 54641
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSKDFLWGGATAANQCEGGYNQGGRGLANVDLVPHGKDRFPIITGEMKHLEFDEEHFY CCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCEEECCHHCCCCCHHHCC PAKEAIDMYHHWKEDLALFAEMGFKTYRMSIAWTRIFPKGDEQEPNEEGLQFYEDIFREC CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH QRLGIEPLVTITHFDCPVHLIKEYGGWRNRKMVGFYENLARAIFTRYKGLVRYWLTFNEI HHCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH NMLLHAPFMGAGLVFEEGENKEQAKYLAAHHELLASALATKIGHEVDPENKIGCMLAAGD HHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC YYPFDCNPENVFEAQKQNHDNLFFIDVQSRGKYPNYLLKRLEREEITLPIEKGDLEILAE CCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEEC NTVDFISFSYYASRVAKVKDEDADKSAGNIFESVKNPYLEASEWGWQIDPLGLRITMNSI CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHCCCCEECCCEEEEEHHHH YDRYQKPLFIVENGLGAVDKPDENGFVADDYRIDYMAAHIKEMKKAVELDGVELLGYTSW HHHHCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC GCIDLVSAGTGEMSKRYGFIYVDRDDYGKGSLKRTPKKSFNWYKKVIASNGEDLTNE CHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PFSKDFLWGGATAANQCEGGYNQGGRGLANVDLVPHGKDRFPIITGEMKHLEFDEEHFY CCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCEEECCHHCCCCCHHHCC PAKEAIDMYHHWKEDLALFAEMGFKTYRMSIAWTRIFPKGDEQEPNEEGLQFYEDIFREC CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH QRLGIEPLVTITHFDCPVHLIKEYGGWRNRKMVGFYENLARAIFTRYKGLVRYWLTFNEI HHCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH NMLLHAPFMGAGLVFEEGENKEQAKYLAAHHELLASALATKIGHEVDPENKIGCMLAAGD HHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC YYPFDCNPENVFEAQKQNHDNLFFIDVQSRGKYPNYLLKRLEREEITLPIEKGDLEILAE CCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEEC NTVDFISFSYYASRVAKVKDEDADKSAGNIFESVKNPYLEASEWGWQIDPLGLRITMNSI CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHCCCCEECCCEEEEEHHHH YDRYQKPLFIVENGLGAVDKPDENGFVADDYRIDYMAAHIKEMKKAVELDGVELLGYTSW HHHHCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC GCIDLVSAGTGEMSKRYGFIYVDRDDYGKGSLKRTPKKSFNWYKKVIASNGEDLTNE CHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1630307; 9278503 [H]