Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yqjD

Identifier: 15673632

GI number: 15673632

Start: 1698360

End: 1700366

Strand: Reverse

Name: yqjD

Synonym: L98109

Alternate gene names: NA

Gene position: 1700366-1698360 (Counterclockwise)

Preceding gene: 15673633

Following gene: 15673630

Centisome position: 71.88

GC content: 36.37

Gene sequence:

>2007_bases
ATGTCAAACAAAAATAAAAAAAATAGAAACAAAAACAAAAATAATAACAATAATAAACCAAAAAATGAGCAACAAATTGG
TGAAAAAACTTTGAAACTTCAAGATTTACAAGATTTTACCGTAGGGCAAATTGTTGAAGAATCAAAACGTGTTGATAAAG
AAAATGAAGAAAATGAGTCTGTTTTAGATAAATATATTCGTCAGCACCGTGGAGAAATTGAAGAAGCTAAAAGTAAAAAT
TTGGACGAATTCATTCAGGCAGAACGTACAAATATAGAAGTTCCGGTTGAAGAAGAAAAAGAAGCTAAGTCAGAAAAACT
TCAAGAAGTTTCCAAAGAGGAAATCGACGAGAATGATGAATTAGCAGCTTCAAAAATAGATTCTGAAAAAGTTACTGACA
GTTCTGATTCTGATTTGTCAGCAGAAAATAAAGACTTAGAAGTTGCTGACAAGGAAAGCGAAGAAACTAAAAAATCAAAA
AATGATTTAGTTTTAGATCCAGTTGTGATGGTCGACGCTCCTGTCAGTACTTTGCCAGAGCAAAAAGAAGCTCCGCAAGT
TGAAGAAGTCAAGAAAACTGAACCAACTGACGAAGAAGAAGCCGAAAGTCCACAAGATGAGAAGTTAGTTGCTGCACCAG
TTATGATGTCAGCAAACGAAGTTCCAATGGACGAGCCAAGTGAACCAGAAATTTCTGAAACTGACGCTGACACTAAAACT
GATTCAATAATTGACGAAAAATCAGAAGTTGAACCAAAAGTAACAGAAGAACCAGCAGAAGAAATTAAATCTGATTCAAA
AGAAGATTCTACTGAAAATAATCAAGCCCTTGAATCGGGAGCTGAGGAAAAAGTGACAGATTCACCAAAAGAGACAAAAA
GTGATATTCCTGATAAAGTTATTACTGCTGAATCAGTTTCACCTCACTTACTAGCTGAAACAACATCCTTTAAAGCAGAT
AAAGTAGAAGAAAATGCGGCAAAAATTACTGACGAAAAGTCAAAAAATCGTAAAAAACCAATCATTATTGGTCTATGTGC
AATTGTCTTAATTGCAGCTGGAGCGATTGGATTTGCCCAATATAATAGTCATCAAAAAGGGAAAACGGTTCAAACTTCTC
AAAGCAGTCAGAGTGATTTAGATAAATATCAGAAACAATACGATGCTTTTTTCACTGACAAATCACATACTATTTTGAGA
AATAGTCAATTTAGCAAGTTATCAGCTCTTGAAACTTTAGTTGATGCTCACAAAAATTCCATGGCATGGTCAAATGCAGT
TTCTGATACAGAAAGCCTAAAAGACCAAATTAATGCGATTAAGAAAGTGAATGCTCTCTTTACTAGCGCAGCAATTACTG
ACGGAAAACTTGATTCATCAGCTAAAGTAGTGGCAAATGTAAAAGTTCCAGAAACTCCTAAAACAACCAATGAAACCCTG
AATAAATTACTGACACAAGCCATTGATTTAGCTAAGAGCCAAGTTGCTAAGGAAAGTTCAGCTAAAGCGTCTGCAAGTGC
AGCAGAAGCCAAAGCGAATCAAGGAGCTACTAGCCAAAGTTCTACATCAAGTACAGCTAGTCAAAGCAATTCTACGACGA
CTCCTTCGTCAGCAGCTTCAGCAGGTTCAAGTACAAATGCCAGCACAAGTAGTAATGCTAATGGTTTGAGTAGCAACGGA
GTTAATTTAGAAGTATCAGCAGCACGTGTCCAACCTCAAGCTGGAGTCAACACGAATGATCCTGCTTTCACATGGGGAGC
TGGAATTAAAGAAATGGTTCTGAATAAAGCCCGTGAACGCGGCTATATTACAGGAGATAATTATATTTTAGTTCCAACAG
CGATTCATACAACCAATGGTTCCCAAGGTTTCCCAGCCGGAATTGTTAGTGGTTATTACAATCTTTATGCACCAGATGGT
CGGTATTTAGTATCAATCAATGCTAAAACAGGTTTCTTTGTTGGTAATGGTTCTGGTCATGCTGATAACTTAGATTATGA
CGCATAG

Upstream 100 bases:

>100_bases
GTGATGACGGCTGTCGGTAAAAATTCAGACGAGTTTGAGCAACTCTCGTTGTCTGATTCACCATTTTATTGGAATTGTGG
GAATCTTATTCGGAGGAAAA

Downstream 100 bases:

>100_bases
AAAATAAAAAATAATCATCATTTTGATGATTATTTTTTTTACTGACAGAAACTTACTGACAAAAATTTACTGACAAAAAA
ACTTTCGCCAAAATCAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 668; Mature: 667

Protein sequence:

>668_residues
MSNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENESVLDKYIRQHRGEIEEAKSKN
LDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDELAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSK
NDLVLDPVVMVDAPVSTLPEQKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT
DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKVITAESVSPHLLAETTSFKAD
KVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQYNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILR
NSQFSKLSALETLVDAHKNSMAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL
NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAASAGSSTNASTSSNANGLSSNG
VNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARERGYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDG
RYLVSINAKTGFFVGNGSGHADNLDYDA

Sequences:

>Translated_668_residues
MSNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENESVLDKYIRQHRGEIEEAKSKN
LDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDELAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSK
NDLVLDPVVMVDAPVSTLPEQKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT
DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKVITAESVSPHLLAETTSFKAD
KVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQYNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILR
NSQFSKLSALETLVDAHKNSMAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL
NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAASAGSSTNASTSSNANGLSSNG
VNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARERGYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDG
RYLVSINAKTGFFVGNGSGHADNLDYDA
>Mature_667_residues
SNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENESVLDKYIRQHRGEIEEAKSKNL
DEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDELAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSKN
DLVLDPVVMVDAPVSTLPEQKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKTD
SIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKVITAESVSPHLLAETTSFKADK
VEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQYNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILRN
SQFSKLSALETLVDAHKNSMAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETLN
KLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAASAGSSTNASTSSNANGLSSNGV
NLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARERGYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDGR
YLVSINAKTGFFVGNGSGHADNLDYDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72302; Mature: 72171

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENES
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VLDKYIRQHRGEIEEAKSKNLDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDE
HHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
LAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSKNDLVLDPVVMVDAPVSTLPE
HHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCEEEECCCHHHCCC
QKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT
CCCCCCHHHHHCCCCCCHHHHCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCHH
DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKV
HHHHCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCCHHHHHCCCCCE
ITAESVSPHLLAETTSFKADKVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQ
EECCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
YNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILRNSQFSKLSALETLVDAHKNS
HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
MAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHH
NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHC
AGSSTNASTSSNANGLSSNGVNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARER
CCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCCCCCCCCCEECCCCHHHHHHHHHHHC
GYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDGRYLVSINAKTGFFVGNGSGH
CEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCEEECCCCCEEEEEECCCCEEEECCCCC
ADNLDYDA
CCCCCCCC
>Mature Secondary Structure 
SNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENES
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VLDKYIRQHRGEIEEAKSKNLDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDE
HHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
LAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSKNDLVLDPVVMVDAPVSTLPE
HHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCEEEECCCHHHCCC
QKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT
CCCCCCHHHHHCCCCCCHHHHCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCHH
DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKV
HHHHCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCCHHHHHCCCCCE
ITAESVSPHLLAETTSFKADKVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQ
EECCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
YNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILRNSQFSKLSALETLVDAHKNS
HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
MAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHH
NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHC
AGSSTNASTSSNANGLSSNGVNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARER
CCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCCCCCCCCCEECCCCHHHHHHHHHHHC
GYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDGRYLVSINAKTGFFVGNGSGH
CEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCEEECCCCCEEEEEECCCCEEEECCCCC
ADNLDYDA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA