| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yqjD
Identifier: 15673632
GI number: 15673632
Start: 1698360
End: 1700366
Strand: Reverse
Name: yqjD
Synonym: L98109
Alternate gene names: NA
Gene position: 1700366-1698360 (Counterclockwise)
Preceding gene: 15673633
Following gene: 15673630
Centisome position: 71.88
GC content: 36.37
Gene sequence:
>2007_bases ATGTCAAACAAAAATAAAAAAAATAGAAACAAAAACAAAAATAATAACAATAATAAACCAAAAAATGAGCAACAAATTGG TGAAAAAACTTTGAAACTTCAAGATTTACAAGATTTTACCGTAGGGCAAATTGTTGAAGAATCAAAACGTGTTGATAAAG AAAATGAAGAAAATGAGTCTGTTTTAGATAAATATATTCGTCAGCACCGTGGAGAAATTGAAGAAGCTAAAAGTAAAAAT TTGGACGAATTCATTCAGGCAGAACGTACAAATATAGAAGTTCCGGTTGAAGAAGAAAAAGAAGCTAAGTCAGAAAAACT TCAAGAAGTTTCCAAAGAGGAAATCGACGAGAATGATGAATTAGCAGCTTCAAAAATAGATTCTGAAAAAGTTACTGACA GTTCTGATTCTGATTTGTCAGCAGAAAATAAAGACTTAGAAGTTGCTGACAAGGAAAGCGAAGAAACTAAAAAATCAAAA AATGATTTAGTTTTAGATCCAGTTGTGATGGTCGACGCTCCTGTCAGTACTTTGCCAGAGCAAAAAGAAGCTCCGCAAGT TGAAGAAGTCAAGAAAACTGAACCAACTGACGAAGAAGAAGCCGAAAGTCCACAAGATGAGAAGTTAGTTGCTGCACCAG TTATGATGTCAGCAAACGAAGTTCCAATGGACGAGCCAAGTGAACCAGAAATTTCTGAAACTGACGCTGACACTAAAACT GATTCAATAATTGACGAAAAATCAGAAGTTGAACCAAAAGTAACAGAAGAACCAGCAGAAGAAATTAAATCTGATTCAAA AGAAGATTCTACTGAAAATAATCAAGCCCTTGAATCGGGAGCTGAGGAAAAAGTGACAGATTCACCAAAAGAGACAAAAA GTGATATTCCTGATAAAGTTATTACTGCTGAATCAGTTTCACCTCACTTACTAGCTGAAACAACATCCTTTAAAGCAGAT AAAGTAGAAGAAAATGCGGCAAAAATTACTGACGAAAAGTCAAAAAATCGTAAAAAACCAATCATTATTGGTCTATGTGC AATTGTCTTAATTGCAGCTGGAGCGATTGGATTTGCCCAATATAATAGTCATCAAAAAGGGAAAACGGTTCAAACTTCTC AAAGCAGTCAGAGTGATTTAGATAAATATCAGAAACAATACGATGCTTTTTTCACTGACAAATCACATACTATTTTGAGA AATAGTCAATTTAGCAAGTTATCAGCTCTTGAAACTTTAGTTGATGCTCACAAAAATTCCATGGCATGGTCAAATGCAGT TTCTGATACAGAAAGCCTAAAAGACCAAATTAATGCGATTAAGAAAGTGAATGCTCTCTTTACTAGCGCAGCAATTACTG ACGGAAAACTTGATTCATCAGCTAAAGTAGTGGCAAATGTAAAAGTTCCAGAAACTCCTAAAACAACCAATGAAACCCTG AATAAATTACTGACACAAGCCATTGATTTAGCTAAGAGCCAAGTTGCTAAGGAAAGTTCAGCTAAAGCGTCTGCAAGTGC AGCAGAAGCCAAAGCGAATCAAGGAGCTACTAGCCAAAGTTCTACATCAAGTACAGCTAGTCAAAGCAATTCTACGACGA CTCCTTCGTCAGCAGCTTCAGCAGGTTCAAGTACAAATGCCAGCACAAGTAGTAATGCTAATGGTTTGAGTAGCAACGGA GTTAATTTAGAAGTATCAGCAGCACGTGTCCAACCTCAAGCTGGAGTCAACACGAATGATCCTGCTTTCACATGGGGAGC TGGAATTAAAGAAATGGTTCTGAATAAAGCCCGTGAACGCGGCTATATTACAGGAGATAATTATATTTTAGTTCCAACAG CGATTCATACAACCAATGGTTCCCAAGGTTTCCCAGCCGGAATTGTTAGTGGTTATTACAATCTTTATGCACCAGATGGT CGGTATTTAGTATCAATCAATGCTAAAACAGGTTTCTTTGTTGGTAATGGTTCTGGTCATGCTGATAACTTAGATTATGA CGCATAG
Upstream 100 bases:
>100_bases GTGATGACGGCTGTCGGTAAAAATTCAGACGAGTTTGAGCAACTCTCGTTGTCTGATTCACCATTTTATTGGAATTGTGG GAATCTTATTCGGAGGAAAA
Downstream 100 bases:
>100_bases AAAATAAAAAATAATCATCATTTTGATGATTATTTTTTTTACTGACAGAAACTTACTGACAAAAATTTACTGACAAAAAA ACTTTCGCCAAAATCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MSNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENESVLDKYIRQHRGEIEEAKSKN LDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDELAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSK NDLVLDPVVMVDAPVSTLPEQKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKVITAESVSPHLLAETTSFKAD KVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQYNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILR NSQFSKLSALETLVDAHKNSMAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAASAGSSTNASTSSNANGLSSNG VNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARERGYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDG RYLVSINAKTGFFVGNGSGHADNLDYDA
Sequences:
>Translated_668_residues MSNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENESVLDKYIRQHRGEIEEAKSKN LDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDELAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSK NDLVLDPVVMVDAPVSTLPEQKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKVITAESVSPHLLAETTSFKAD KVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQYNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILR NSQFSKLSALETLVDAHKNSMAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAASAGSSTNASTSSNANGLSSNG VNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARERGYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDG RYLVSINAKTGFFVGNGSGHADNLDYDA >Mature_667_residues SNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENESVLDKYIRQHRGEIEEAKSKNL DEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDELAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSKN DLVLDPVVMVDAPVSTLPEQKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKTD SIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKVITAESVSPHLLAETTSFKADK VEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQYNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILRN SQFSKLSALETLVDAHKNSMAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETLN KLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAASAGSSTNASTSSNANGLSSNGV NLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARERGYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDGR YLVSINAKTGFFVGNGSGHADNLDYDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72302; Mature: 72171
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENES CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VLDKYIRQHRGEIEEAKSKNLDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDE HHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH LAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSKNDLVLDPVVMVDAPVSTLPE HHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCEEEECCCHHHCCC QKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT CCCCCCHHHHHCCCCCCHHHHCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCHH DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKV HHHHCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCCHHHHHCCCCCE ITAESVSPHLLAETTSFKADKVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQ EECCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHH YNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILRNSQFSKLSALETLVDAHKNS HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH MAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHH NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHC AGSSTNASTSSNANGLSSNGVNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARER CCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCCCCCCCCCEECCCCHHHHHHHHHHHC GYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDGRYLVSINAKTGFFVGNGSGH CEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCEEECCCCCEEEEEECCCCEEEECCCCC ADNLDYDA CCCCCCCC >Mature Secondary Structure SNKNKKNRNKNKNNNNNKPKNEQQIGEKTLKLQDLQDFTVGQIVEESKRVDKENEENES CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VLDKYIRQHRGEIEEAKSKNLDEFIQAERTNIEVPVEEEKEAKSEKLQEVSKEEIDENDE HHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH LAASKIDSEKVTDSSDSDLSAENKDLEVADKESEETKKSKNDLVLDPVVMVDAPVSTLPE HHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCEEEECCCHHHCCC QKEAPQVEEVKKTEPTDEEEAESPQDEKLVAAPVMMSANEVPMDEPSEPEISETDADTKT CCCCCCHHHHHCCCCCCHHHHCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCHH DSIIDEKSEVEPKVTEEPAEEIKSDSKEDSTENNQALESGAEEKVTDSPKETKSDIPDKV HHHHCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCCHHHHHCCCCCE ITAESVSPHLLAETTSFKADKVEENAAKITDEKSKNRKKPIIIGLCAIVLIAAGAIGFAQ EECCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHH YNSHQKGKTVQTSQSSQSDLDKYQKQYDAFFTDKSHTILRNSQFSKLSALETLVDAHKNS HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH MAWSNAVSDTESLKDQINAIKKVNALFTSAAITDGKLDSSAKVVANVKVPETPKTTNETL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHH NKLLTQAIDLAKSQVAKESSAKASASAAEAKANQGATSQSSTSSTASQSNSTTTPSSAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHC AGSSTNASTSSNANGLSSNGVNLEVSAARVQPQAGVNTNDPAFTWGAGIKEMVLNKARER CCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCCCCCCCCCEECCCCHHHHHHHHHHHC GYITGDNYILVPTAIHTTNGSQGFPAGIVSGYYNLYAPDGRYLVSINAKTGFFVGNGSGH CEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCEEECCCCCEEEEEECCCCEEEECCCCC ADNLDYDA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA