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The map label for this gene is yqjE

Identifier: 15673633

GI number: 15673633

Start: 1700514

End: 1701668

Strand: Reverse

Name: yqjE

Synonym: L100263

Alternate gene names: 15673633

Gene position: 1701668-1700514 (Counterclockwise)

Preceding gene: 15673634

Following gene: 15673632

Centisome position: 71.93

GC content: 36.54

Gene sequence:

>1155_bases
ATGCAAAAGAAATTCAAGTTATTAGCAACTTCTTCAAGTGGTTTAGAGAGTTTAGTTGCTCGCGAACTTCGTAATCTGGA
AATTGAAAATGTTTCAATTGACGACCGTTCACGTGTCTTCTTTGAGGGAAATTTGGCAACAATTGCTAAGGCGAATCTTT
GGTTAAGAACGGCTGACCGTGTAAAAATTGTAGTTGGGGAATTTAAAGCTAGAACATTTGATGAATTGTTTGAAAATGTT
TATGCGCTTCCCTGGGCAGAGCTTATTCCTTTTGGAAGCCAATTTCCTGTCAGCAAAGCTAAAGCGGTGAAATCAACTTT
ACATAATGAGCCGTCAATTCAAAGTATCACTAAAAAAGCGATTGTCAAAAAATTACAGACGACATATCATCGTCCTGAAG
GTGTTCCAATTCCTGAAAATGGAGCTAAATTTTCAATTGAGATTGCTTTACATAAAGATATGGCAACTGTATTGATTGAT
ACGACTGGCGATTCTTTATTTAAACGAGGCTATCGTTCAGAAAAAGGAGAAGCTCCTTTGAAAGAAAATATGGCAGCTTC
GATTATTTTATTAACCAATTGGTTAGCAAATCCTCGTCGTACTTTTGTTGATCCTACTTGTGGTTCTGGAACATTTACAA
TTGAAGCAGCAATGCTGGCTTTAAATATGGCACCAGGAATGAATCGTCCTTTTGCTTTTACTGCATGGCCTTGGTTTGAT
GAAGAAATTTTGAAACAAGAAAAAGCTTTGGCCAAAAAACAAATTCGTACAGATTTAGAATTGGATATTCAAGGTTTTGA
CATTGATGGAAAAATGATTGAAATTGCAAAACATAATGCACTTGCGGCAGGCCTTTCAGATGTGATAAAATATAAGCAAA
TGCGACTTCAAGATTTTAGAACTGATAAGCTTGACGGTGTCTTAGTTTCTAACCCGCCTTATGGGGTGCGTTTGGAAGTT
GAAGAAGCTGTAGCAGCTCTTTATGGTGAAATGGGTAAAACTTTTGCGCCACTAGAAACTTGGAGTAAATACATTTTGAC
GAGTGATGTCGCTTTTGAAAAGCATTATGGGGCAAAAGCAACTAAAAAACGCAAACTATATAACGGAACACTTAGAACAG
ATTTGTATATGTATTTCGGAAAACGTATGAAATAA

Upstream 100 bases:

>100_bases
GCTGGGGCTTTTAGCCTCGGCTTTTTTTGATAAATAGTGTTTAATTGAAATAGATAGAATTATCTCTGCTCATTTTATGC
AGAGAATGGAAAGTTAAAAA

Downstream 100 bases:

>100_bases
ATTTTACTGACAGAACAAAAAGCTATTACTAAAACAAAAAAAATTTAGTGATGACGGCTGTCGGTAAAAATTCAGACGAG
TTTGAGCAACTCTCGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MQKKFKLLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADRVKIVVGEFKARTFDELFENV
YALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKAIVKKLQTTYHRPEGVPIPENGAKFSIEIALHKDMATVLID
TTGDSLFKRGYRSEKGEAPLKENMAASIILLTNWLANPRRTFVDPTCGSGTFTIEAAMLALNMAPGMNRPFAFTAWPWFD
EEILKQEKALAKKQIRTDLELDIQGFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFRTDKLDGVLVSNPPYGVRLEV
EEAVAALYGEMGKTFAPLETWSKYILTSDVAFEKHYGAKATKKRKLYNGTLRTDLYMYFGKRMK

Sequences:

>Translated_384_residues
MQKKFKLLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADRVKIVVGEFKARTFDELFENV
YALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKAIVKKLQTTYHRPEGVPIPENGAKFSIEIALHKDMATVLID
TTGDSLFKRGYRSEKGEAPLKENMAASIILLTNWLANPRRTFVDPTCGSGTFTIEAAMLALNMAPGMNRPFAFTAWPWFD
EEILKQEKALAKKQIRTDLELDIQGFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFRTDKLDGVLVSNPPYGVRLEV
EEAVAALYGEMGKTFAPLETWSKYILTSDVAFEKHYGAKATKKRKLYNGTLRTDLYMYFGKRMK
>Mature_384_residues
MQKKFKLLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADRVKIVVGEFKARTFDELFENV
YALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKAIVKKLQTTYHRPEGVPIPENGAKFSIEIALHKDMATVLID
TTGDSLFKRGYRSEKGEAPLKENMAASIILLTNWLANPRRTFVDPTCGSGTFTIEAAMLALNMAPGMNRPFAFTAWPWFD
EEILKQEKALAKKQIRTDLELDIQGFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFRTDKLDGVLVSNPPYGVRLEV
EEAVAALYGEMGKTFAPLETWSKYILTSDVAFEKHYGAKATKKRKLYNGTLRTDLYMYFGKRMK

Specific function: Unknown

COG id: COG0116

COG function: function code L; Predicted N6-adenine-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

Organism=Escherichia coli, GI1787181, Length=343, Percent_Identity=31.7784256559767, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 43289; Mature: 43289

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS51165 THUMP ; PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKFKLLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADR
CCCCEEEEEECCCHHHHHHHHHHHCCEEEECCCCCCCEEEEECCEEEEEECEEEEEECCC
VKIVVGEFKARTFDELFENVYALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKA
EEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
IVKKLQTTYHRPEGVPIPENGAKFSIEIALHKDMATVLIDTTGDSLFKRGYRSEKGEAPL
HHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCHHHHHCCCCCCCCCCCH
KENMAASIILLTNWLANPRRTFVDPTCGSGTFTIEAAMLALNMAPGMNRPFAFTAWPWFD
HHHHHHEEEEEEHHCCCCCCEECCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEEECCCCC
EEILKQEKALAKKQIRTDLELDIQGFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFR
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
TDKLDGVLVSNPPYGVRLEVEEAVAALYGEMGKTFAPLETWSKYILTSDVAFEKHYGAKA
CCCCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCCCH
TKKRKLYNGTLRTDLYMYFGKRMK
HHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKKFKLLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADR
CCCCEEEEEECCCHHHHHHHHHHHCCEEEECCCCCCCEEEEECCEEEEEECEEEEEECCC
VKIVVGEFKARTFDELFENVYALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKA
EEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
IVKKLQTTYHRPEGVPIPENGAKFSIEIALHKDMATVLIDTTGDSLFKRGYRSEKGEAPL
HHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCHHHHHCCCCCCCCCCCH
KENMAASIILLTNWLANPRRTFVDPTCGSGTFTIEAAMLALNMAPGMNRPFAFTAWPWFD
HHHHHHEEEEEEHHCCCCCCEECCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEEECCCCC
EEILKQEKALAKKQIRTDLELDIQGFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFR
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
TDKLDGVLVSNPPYGVRLEVEEAVAALYGEMGKTFAPLETWSKYILTSDVAFEKHYGAKA
CCCCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCCCH
TKKRKLYNGTLRTDLYMYFGKRMK
HHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 2423526 [H]