Click here to switch to the map view.

The map label for this gene is ykdA

Identifier: 15672985

GI number: 15672985

Start: 1031127

End: 1031642

Strand: Direct

Name: ykdA

Synonym: L30853

Alternate gene names: NA

Gene position: 1031127-1031642 (Clockwise)

Preceding gene: 15672984

Following gene: 15672986

Centisome position: 43.59

GC content: 30.81

Gene sequence:

>516_bases
ATGAATAAAGTGAAAAATAAAGAAGAATTATTAGATGTTAGTTTTAACACAATGCTTCTGGGTAAAAGTATTTTTGCTTT
TGTTGAATTTATATCAGGTTTACTTTTAATCTTTGTTCCACTTGATTTAATTAAAGCAACTATTCACCATCTTGCACTGG
CTATTTCTCTAAGCCCGTTCTCTACGATGATTACAAATGCAGGAGAAAGGCTGACCAATGATGCTACTTTATTTGCTATT
GTATATTTACTTTTACATGGTGCACTAAAGTTGGTGACGTTGGCTCTGCTCTGGAAAAAGATTCTATGGTCATACCCCTT
ATCAATATTACTTTTAGTTGGTTTTATTCTTTATCAAATCTTTGAATTTTTTAATCATGGGTCAATTTCAATGCTCGTTT
TATGTGCGGTTGACGTATTGATGATTATTTTAACCTTATTAGAATACCGTAAGTTAAAAGCACATATTTCAAAAGAGGGC
TCATACTCTTCCTTAAAAAATAGTAAAGTAAATTAG

Upstream 100 bases:

>100_bases
GCTAAAATTGATTTGCCAAATCATAAATCTCTCATTGAAACCGTTCGTGGTATAGGTTATCGTTTAAATAACGAAAACTG
AGAGAGGAAAAGAGGTAGCC

Downstream 100 bases:

>100_bases
CGAATGAAAGAAATAGAATCAAAAACAAGTGCCAAAATTATTACCGATACTTTTGTCCGTATTTTCTTAATTTTTAGTCT
GTTGATTACAATCATTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNKVKNKEELLDVSFNTMLLGKSIFAFVEFISGLLLIFVPLDLIKATIHHLALAISLSPFSTMITNAGERLTNDATLFAI
VYLLLHGALKLVTLALLWKKILWSYPLSILLLVGFILYQIFEFFNHGSISMLVLCAVDVLMIILTLLEYRKLKAHISKEG
SYSSLKNSKVN

Sequences:

>Translated_171_residues
MNKVKNKEELLDVSFNTMLLGKSIFAFVEFISGLLLIFVPLDLIKATIHHLALAISLSPFSTMITNAGERLTNDATLFAI
VYLLLHGALKLVTLALLWKKILWSYPLSILLLVGFILYQIFEFFNHGSISMLVLCAVDVLMIILTLLEYRKLKAHISKEG
SYSSLKNSKVN
>Mature_171_residues
MNKVKNKEELLDVSFNTMLLGKSIFAFVEFISGLLLIFVPLDLIKATIHHLALAISLSPFSTMITNAGERLTNDATLFAI
VYLLLHGALKLVTLALLWKKILWSYPLSILLLVGFILYQIFEFFNHGSISMLVLCAVDVLMIILTLLEYRKLKAHISKEG
SYSSLKNSKVN

Specific function: Unknown

COG id: COG4331

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19216; Mature: 19216

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVKNKEELLDVSFNTMLLGKSIFAFVEFISGLLLIFVPLDLIKATIHHLALAISLSPF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STMITNAGERLTNDATLFAIVYLLLHGALKLVTLALLWKKILWSYPLSILLLVGFILYQI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FEFFNHGSISMLVLCAVDVLMIILTLLEYRKLKAHISKEGSYSSLKNSKVN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
>Mature Secondary Structure
MNKVKNKEELLDVSFNTMLLGKSIFAFVEFISGLLLIFVPLDLIKATIHHLALAISLSPF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STMITNAGERLTNDATLFAIVYLLLHGALKLVTLALLWKKILWSYPLSILLLVGFILYQI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FEFFNHGSISMLVLCAVDVLMIILTLLEYRKLKAHISKEGSYSSLKNSKVN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA