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The map label for this gene is llrE

Identifier: 15672984

GI number: 15672984

Start: 1030421

End: 1031107

Strand: Direct

Name: llrE

Synonym: L0129

Alternate gene names: 15672984

Gene position: 1030421-1031107 (Clockwise)

Preceding gene: 15672983

Following gene: 15672985

Centisome position: 43.56

GC content: 36.97

Gene sequence:

>687_bases
ATGAGCTACCATGTTTTGATTGTTGAAGACGAGCCGAGTCTCTCTGATTATGTCAAAAAAGAGTTGATTTTTGAAGATTA
TCAAGTTTCAACCGCTTTTGATGGCCTTTCTGCTTTGGAAATATTTGAAACTGCTAAGCCTGCTATTGATGTTGTTTTGC
TTGATTGGATGATTCCAAAATTAGATGGCTTGACAGTGTTACGTCGAATGAAAAAAATTCAGCCTGATACACCAATTATC
TTCTTGACAGCGTGTGATTATATTGGAGATAAAGTCGCCGGTCTTGATGCGGGAGCAGATGATTATATTACTAAACCTTT
TGAAATTGAGGAGCTATTGGCTCGGCTGAGGTTGATTTTTAGGAAATGGTCAAATTCTTCTTCCAAGGTCTATGAACTTG
ATTACTTAAAAGTTGATTTAAGTGCTCATACAACAGAAGTGGCTGGTAAAACAGTCAATTTGACCCAAAGAGAATTTTCT
TTGTTAAGCTATTTTTTAGAACATCGTGGTATAGTGGTAAGTCGAGCAGATATTTTGGATGATGTATGGGGCATGGATTT
TGACGGTCAGGAAAATACCGTGGATGCTTATGTTCGCTACCTTCGTGCTAAAATTGATTTGCCAAATCATAAATCTCTCA
TTGAAACCGTTCGTGGTATAGGTTATCGTTTAAATAACGAAAACTGA

Upstream 100 bases:

>100_bases
CAGAAAAACCGTATGGTTTTTTTGTTTTATGCTTGTTATAATGAGCAAGTAAATAAAAATTTTTGATTACATTTGCAATT
AAAGAAAGGCGAGGTGCCAA

Downstream 100 bases:

>100_bases
GAGAGGAAAAGAGGTAGCCATGAATAAAGTGAAAAATAAAGAAGAATTATTAGATGTTAGTTTTAACACAATGCTTCTGG
GTAAAAGTATTTTTGCTTTT

Product: two-component system regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSYHVLIVEDEPSLSDYVKKELIFEDYQVSTAFDGLSALEIFETAKPAIDVVLLDWMIPKLDGLTVLRRMKKIQPDTPII
FLTACDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIFRKWSNSSSKVYELDYLKVDLSAHTTEVAGKTVNLTQREFS
LLSYFLEHRGIVVSRADILDDVWGMDFDGQENTVDAYVRYLRAKIDLPNHKSLIETVRGIGYRLNNEN

Sequences:

>Translated_228_residues
MSYHVLIVEDEPSLSDYVKKELIFEDYQVSTAFDGLSALEIFETAKPAIDVVLLDWMIPKLDGLTVLRRMKKIQPDTPII
FLTACDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIFRKWSNSSSKVYELDYLKVDLSAHTTEVAGKTVNLTQREFS
LLSYFLEHRGIVVSRADILDDVWGMDFDGQENTVDAYVRYLRAKIDLPNHKSLIETVRGIGYRLNNEN
>Mature_227_residues
SYHVLIVEDEPSLSDYVKKELIFEDYQVSTAFDGLSALEIFETAKPAIDVVLLDWMIPKLDGLTVLRRMKKIQPDTPIIF
LTACDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIFRKWSNSSSKVYELDYLKVDLSAHTTEVAGKTVNLTQREFSL
LSYFLEHRGIVVSRADILDDVWGMDFDGQENTVDAYVRYLRAKIDLPNHKSLIETVRGIGYRLNNEN

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.4615384615385, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=34.9344978165939, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=35.7798165137615, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=34.2105263157895, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=33.9449541284404, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=34.2222222222222, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=34.375, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=30.8035714285714, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=28.82096069869, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=31.6017316017316, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=33.6244541484716, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=33.0357142857143, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=30, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.1385281385281, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788550, Length=137, Percent_Identity=32.1167883211679, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788905, Length=109, Percent_Identity=33.9449541284404, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790299, Length=147, Percent_Identity=29.9319727891156, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26062; Mature: 25931

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHVLIVEDEPSLSDYVKKELIFEDYQVSTAFDGLSALEIFETAKPAIDVVLLDWMIPK
CCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCC
LDGLTVLRRMKKIQPDTPIIFLTACDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIF
CCHHHHHHHHHHCCCCCCEEEEEECHHHCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
RKWSNSSSKVYELDYLKVDLSAHTTEVAGKTVNLTQREFSLLSYFLEHRGIVVSRADILD
HHHCCCCCEEEEEEEEEEECCCCHHHHCCCEEEHHHHHHHHHHHHHHHCCEEEEHHHHHH
DVWGMDFDGQENTVDAYVRYLRAKIDLPNHKSLIETVRGIGYRLNNEN
HHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCC
>Mature Secondary Structure 
SYHVLIVEDEPSLSDYVKKELIFEDYQVSTAFDGLSALEIFETAKPAIDVVLLDWMIPK
CEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCC
LDGLTVLRRMKKIQPDTPIIFLTACDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIF
CCHHHHHHHHHHCCCCCCEEEEEECHHHCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
RKWSNSSSKVYELDYLKVDLSAHTTEVAGKTVNLTQREFSLLSYFLEHRGIVVSRADILD
HHHCCCCCEEEEEEEEEEECCCCHHHHCCCEEEHHHHHHHHHHHHHHHCCEEEEHHHHHH
DVWGMDFDGQENTVDAYVRYLRAKIDLPNHKSLIETVRGIGYRLNNEN
HHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]