| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ygjB
Identifier: 15672675
GI number: 15672675
Start: 692276
End: 692728
Strand: Direct
Name: ygjB
Synonym: L92295
Alternate gene names: NA
Gene position: 692276-692728 (Clockwise)
Preceding gene: 15672674
Following gene: 15672676
Centisome position: 29.26
GC content: 38.63
Gene sequence:
>453_bases GTGAAATTTTTCCAATTGGAAAAATTTGCAAAGACAAAAGGAGAAATCAAAATGGCAGAAAAAACTGTACATTCTGAAGA ACTTGGGGATATCGTCATTGCCCCTGAAGTTCTTGAAGTAATTATCGGTATTACAACAGCCAAAATCGATGGGGTACACG CCCTTCGTAACAAACGTTTTTCAGACCGCCTTGGTAAGAAAAATGAAGGCCGTGGTGTTTATATTGACTCAAAAGACGAT AAAGTAGCTGTTGATATCTATGTGTACCTTACTTACGGTGTAAGCCTACCAGCCGTTGCTACAAAAATCCAAAAAGAAGT GAAAGAAGCAGTTGCCCAAGCTACTGAGATTATTGTTGATGAAGTCAATATCCACGTTGTCGGAATTATGACTGAAAAAC AACCAAAACCAGCGCTTGAAGACTTGTTTGATGAGGGATTTTTTGATGCCTAA
Upstream 100 bases:
>100_bases CTTAATTAAGTACGATTACTGAAAAAAGTTACTGACAGCCTTTTGTCAGTAACTTTATGAAGTTTAAAGACTTCGTCAGT AAAGAAAATTCATTTTGTAA
Downstream 100 bases:
>100_bases GACGCTCACTCAACACCAGATTCGTCAACGAGCGGTCCAGGTCTTATTTTCTTATGCTGTCCAAAAAGAAATGGCAACAA ATGTCGTAAGCTCTTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKFFQLEKFAKTKGEIKMAEKTVHSEELGDIVIAPEVLEVIIGITTAKIDGVHALRNKRFSDRLGKKNEGRGVYIDSKDD KVAVDIYVYLTYGVSLPAVATKIQKEVKEAVAQATEIIVDEVNIHVVGIMTEKQPKPALEDLFDEGFFDA
Sequences:
>Translated_150_residues MKFFQLEKFAKTKGEIKMAEKTVHSEELGDIVIAPEVLEVIIGITTAKIDGVHALRNKRFSDRLGKKNEGRGVYIDSKDD KVAVDIYVYLTYGVSLPAVATKIQKEVKEAVAQATEIIVDEVNIHVVGIMTEKQPKPALEDLFDEGFFDA >Mature_150_residues MKFFQLEKFAKTKGEIKMAEKTVHSEELGDIVIAPEVLEVIIGITTAKIDGVHALRNKRFSDRLGKKNEGRGVYIDSKDD KVAVDIYVYLTYGVSLPAVATKIQKEVKEAVAQATEIIVDEVNIHVVGIMTEKQPKPALEDLFDEGFFDA
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 16695; Mature: 16695
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFQLEKFAKTKGEIKMAEKTVHSEELGDIVIAPEVLEVIIGITTAKIDGVHALRNKRF CCCHHHHHHHHCCCCEEHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCHHHHHHCCHH SDRLGKKNEGRGVYIDSKDDKVAVDIYVYLTYGVSLPAVATKIQKEVKEAVAQATEIIVD HHHCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC EVNIHVVGIMTEKQPKPALEDLFDEGFFDA CCCEEEEEEEECCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKFFQLEKFAKTKGEIKMAEKTVHSEELGDIVIAPEVLEVIIGITTAKIDGVHALRNKRF CCCHHHHHHHHCCCCEEHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCHHHHHHCCHH SDRLGKKNEGRGVYIDSKDDKVAVDIYVYLTYGVSLPAVATKIQKEVKEAVAQATEIIVD HHHCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC EVNIHVVGIMTEKQPKPALEDLFDEGFFDA CCCEEEEEEEECCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA