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The map label for this gene is nusB

Identifier: 15672676

GI number: 15672676

Start: 692721

End: 693692

Strand: Direct

Name: nusB

Synonym: L92686

Alternate gene names: 15672676

Gene position: 692721-693692 (Clockwise)

Preceding gene: 15672675

Following gene: 15672677

Centisome position: 29.28

GC content: 33.13

Gene sequence:

>972_bases
ATGCCTAAGACGCTCACTCAACACCAGATTCGTCAACGAGCGGTCCAGGTCTTATTTTCTTATGCTGTCCAAAAAGAAAT
GGCAACAAATGTCGTAAGCTCTTTTAGAGAAAACGTTGAAAAATTAGAAGAAGAACTTTCTCAAACTGTTCGTTTTGACG
TTGATTTTCGTGATGAACGAATTACTGTTCGTAAATTTCCAAAAGGACTTTCTCAACCTTTAGAAGCCATTTATGAAATT
TATGAAATTCTTGGACTTAAAGATATCGAGAAAACAACGGTTGCTAAAGCTCTTGCTTTCATGCGAGATTTTGGTGGTTA
CGCTAAGAAAATGAATGAATATGAAGCAACAAATTTATTTGTTGGTGTCATGGCAAATTTGAAATTGATTCGTTTGTTCC
AAATTGAACTTGATGAAGAACCTGTTGCTCCAAAAGTTCTAGAATTTTTCAAAAATCTTCCAGAAAATGCGACAGCTGAA
CAATCTCTTGAAACTTTCCAAAAAACCTTCTCATTCCTTCATGAAAATGTTCTTGAAAAATATACAAGTGATTTATTCAC
TCCAAGCACTTTAAAAGAAGAACTTGATGAACAATTAGCACAAGCAGAAAATAATGCTCAATCACAATTGTCAGAGCTTT
TGAAAAATACAAAACGCTTTGTTCTCAATTATGACAATGATCGTCCAGAAGATCTTGAAGCTCCTGAATACTTTACACAA
CTTGTTGATGGAGTTTTAGATAAAAAAGAAGATTTGGAAGCAAATATTTCTAAATATTTGACAAAAACTTGGTCATTTTC
ACGTTTGACTCTTGTTGAACAAGCAATCCTTCAAGTTTCTAGTTATGAAATATTATATACAGAAACACCTGATGTTGTTG
CGGTCAATGAAGCAGTTGAGCTTTCAAAAGACTTTAGTGATGAAAAATCAAGCCGATTCATTAATGGTGTATTAACTAAC
TTCTTAAAATAA

Upstream 100 bases:

>100_bases
GAGATTATTGTTGATGAAGTCAATATCCACGTTGTCGGAATTATGACTGAAAAACAACCAAAACCAGCGCTTGAAGACTT
GTTTGATGAGGGATTTTTTG

Downstream 100 bases:

>100_bases
AATTAATAAAAAAGTTACCGATAATTTTATCTGTAGCTTTTTTTTTATTACGTTTTTCTAGCTTTTGTAATTAATGAGTT
ATCTTATTTAACATTACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPKTLTQHQIRQRAVQVLFSYAVQKEMATNVVSSFRENVEKLEEELSQTVRFDVDFRDERITVRKFPKGLSQPLEAIYEI
YEILGLKDIEKTTVAKALAFMRDFGGYAKKMNEYEATNLFVGVMANLKLIRLFQIELDEEPVAPKVLEFFKNLPENATAE
QSLETFQKTFSFLHENVLEKYTSDLFTPSTLKEELDEQLAQAENNAQSQLSELLKNTKRFVLNYDNDRPEDLEAPEYFTQ
LVDGVLDKKEDLEANISKYLTKTWSFSRLTLVEQAILQVSSYEILYTETPDVVAVNEAVELSKDFSDEKSSRFINGVLTN
FLK

Sequences:

>Translated_323_residues
MPKTLTQHQIRQRAVQVLFSYAVQKEMATNVVSSFRENVEKLEEELSQTVRFDVDFRDERITVRKFPKGLSQPLEAIYEI
YEILGLKDIEKTTVAKALAFMRDFGGYAKKMNEYEATNLFVGVMANLKLIRLFQIELDEEPVAPKVLEFFKNLPENATAE
QSLETFQKTFSFLHENVLEKYTSDLFTPSTLKEELDEQLAQAENNAQSQLSELLKNTKRFVLNYDNDRPEDLEAPEYFTQ
LVDGVLDKKEDLEANISKYLTKTWSFSRLTLVEQAILQVSSYEILYTETPDVVAVNEAVELSKDFSDEKSSRFINGVLTN
FLK
>Mature_322_residues
PKTLTQHQIRQRAVQVLFSYAVQKEMATNVVSSFRENVEKLEEELSQTVRFDVDFRDERITVRKFPKGLSQPLEAIYEIY
EILGLKDIEKTTVAKALAFMRDFGGYAKKMNEYEATNLFVGVMANLKLIRLFQIELDEEPVAPKVLEFFKNLPENATAEQ
SLETFQKTFSFLHENVLEKYTSDLFTPSTLKEELDEQLAQAENNAQSQLSELLKNTKRFVLNYDNDRPEDLEAPEYFTQL
VDGVLDKKEDLEANISKYLTKTWSFSRLTLVEQAILQVSSYEILYTETPDVVAVNEAVELSKDFSDEKSSRFINGVLTNF
LK

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 37315; Mature: 37183

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTLTQHQIRQRAVQVLFSYAVQKEMATNVVSSFRENVEKLEEELSQTVRFDVDFRDER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ITVRKFPKGLSQPLEAIYEIYEILGLKDIEKTTVAKALAFMRDFGGYAKKMNEYEATNLF
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVMANLKLIRLFQIELDEEPVAPKVLEFFKNLPENATAEQSLETFQKTFSFLHENVLEK
HHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YTSDLFTPSTLKEELDEQLAQAENNAQSQLSELLKNTKRFVLNYDNDRPEDLEAPEYFTQ
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHH
LVDGVLDKKEDLEANISKYLTKTWSFSRLTLVEQAILQVSSYEILYTETPDVVAVNEAVE
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHH
LSKDFSDEKSSRFINGVLTNFLK
HHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKTLTQHQIRQRAVQVLFSYAVQKEMATNVVSSFRENVEKLEEELSQTVRFDVDFRDER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ITVRKFPKGLSQPLEAIYEIYEILGLKDIEKTTVAKALAFMRDFGGYAKKMNEYEATNLF
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVMANLKLIRLFQIELDEEPVAPKVLEFFKNLPENATAEQSLETFQKTFSFLHENVLEK
HHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YTSDLFTPSTLKEELDEQLAQAENNAQSQLSELLKNTKRFVLNYDNDRPEDLEAPEYFTQ
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHH
LVDGVLDKKEDLEANISKYLTKTWSFSRLTLVEQAILQVSSYEILYTETPDVVAVNEAVE
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHH
LSKDFSDEKSSRFINGVLTNFLK
HHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]