Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669730

Identifier: 15669730

GI number: 15669730

Start: 1512865

End: 1513764

Strand: Direct

Name: 15669730

Synonym: MJ1535

Alternate gene names: NA

Gene position: 1512865-1513764 (Clockwise)

Preceding gene: 15669729

Following gene: 15669733

Centisome position: 90.86

GC content: 25.44

Gene sequence:

>900_bases
ATGAAAAGGCTGTTCTTTATTTTTGTTATGCTTATTGTATTGCTGTGTGGATGCACAAGCAATAAAACAACAAATGTAAA
TAATGAAATAAATATAAATAAGATTGAAACGAACAAAACCTTAGAAAATGAAAGTTTAATTCAAAAAACTGAAAAAAATC
AATTAGCTAAAATAAAAGAAATAAAATATATGTATATTGTCAAAGAAGGAAACAAAACAAAAATTCAGTTTGCTTTAGCT
TATGAGAACGGTAGTTTAGCAAGGGTAAGTAATGGAAAGGTTGTATTGAAGATATTTGACGATAGTGGATTATTGTTTAA
TAAAACATACTACATTAATGAACTTCCCTTAAAAGCTGGATATTACTATGAGATTGAATTGCCAAAAATTAAAGGCTTTT
ATAAAAATGCAAAATTTGTATTGACATTTAAAAATGATAATGTGAATTTATCAAAAACAACCTATGGAACAATTGAAAGA
TATTCTGAAGAAGAAATGAAAGAAATATTTGAAAAAGAATATCATGAAAACTCAATAAAAACTAATATAGAAGAATTTAG
GGATGTTGTGGGGATAAAATTCACTGTAAAAGAATATGGATATTATAAAATTTATAACAATCAAACTGACAGAATTGAAA
AAGTATTTAGAGTTGATTTTGTAGCTAAAAACTTAAATCCTGACACATATGAATTTGCTCCTATAGGAGTGTGTTTAATT
TCTGGAGATAAAAAATATTGGAAAATTGGAGGACTTGATGAAATAGAAATTGGAATTAATCAAGAGATTGCGGGATATTG
GATATTCAACAAACCAGATAGTATAGAAAATCTAAGATTAGATTTTAAAATGGGAAATATCGTTTATGACATCCCATTAA
CACAAAATAATTTAAAATAA

Upstream 100 bases:

>100_bases
AATTGGTAAGAAGGTTATTCCAGCATTAAAAGAGTAAATTAACTTAACTTTTCTTTTTTTATTTTAATTTTTTATATTTT
TTGTTTTATTTGGTGATAGT

Downstream 100 bases:

>100_bases
TTTAGTAATTCTTCTAAAAATATTTTAATTTTTATAATTTTTGCAAGTATTTAATAATATTTGCCATAGCCACACACCCA
TCTCCTACAGCTTTAGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKEIKYMYIVKEGNKTKIQFALA
YENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAGYYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIER
YSEEEMKEIFEKEYHENSIKTNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI
SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK

Sequences:

>Translated_299_residues
MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKEIKYMYIVKEGNKTKIQFALA
YENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAGYYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIER
YSEEEMKEIFEKEYHENSIKTNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI
SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK
>Mature_299_residues
MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKEIKYMYIVKEGNKTKIQFALA
YENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAGYYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIER
YSEEEMKEIFEKEYHENSIKTNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI
SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1535_METJA (Q58930)

Other databases:

- EMBL:   L77117
- PIR:   F64491
- RefSeq:   NP_248543.1
- ProteinModelPortal:   Q58930
- GeneID:   1452443
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1535
- NMPDR:   fig|243232.1.peg.1580
- TIGR:   MJ1535
- OMA:   KFTVKEY
- ProtClustDB:   CLSK876612
- BioCyc:   MJAN243232:MJ_1535-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34959; Mature: 34959

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xed508f4)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEE
IKYMYIVKEGNKTKIQFALAYENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAG
EEEEEEEECCCCEEEEEEEEECCCCEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCC
YYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIERYSEEEMKEIFEKEYHENSIK
EEEEEECCCCCCEECCCEEEEEEECCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHH
TNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI
CCHHHHHHHHCEEEEEECCCEEEEECCCHHHHHHHHHEEEEEECCCCCCEEEEEEEEEEE
SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK
ECCCCEEEECCCCEEEECCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCH
>Mature Secondary Structure
MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEE
IKYMYIVKEGNKTKIQFALAYENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAG
EEEEEEEECCCCEEEEEEEEECCCCEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCC
YYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIERYSEEEMKEIFEKEYHENSIK
EEEEEECCCCCCEECCCEEEEEEECCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHH
TNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI
CCHHHHHHHHCEEEEEECCCEEEEECCCHHHHHHHHHEEEEEECCCCCCEEEEEEEEEEE
SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK
ECCCCEEEECCCCEEEECCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087