| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669730
Identifier: 15669730
GI number: 15669730
Start: 1512865
End: 1513764
Strand: Direct
Name: 15669730
Synonym: MJ1535
Alternate gene names: NA
Gene position: 1512865-1513764 (Clockwise)
Preceding gene: 15669729
Following gene: 15669733
Centisome position: 90.86
GC content: 25.44
Gene sequence:
>900_bases ATGAAAAGGCTGTTCTTTATTTTTGTTATGCTTATTGTATTGCTGTGTGGATGCACAAGCAATAAAACAACAAATGTAAA TAATGAAATAAATATAAATAAGATTGAAACGAACAAAACCTTAGAAAATGAAAGTTTAATTCAAAAAACTGAAAAAAATC AATTAGCTAAAATAAAAGAAATAAAATATATGTATATTGTCAAAGAAGGAAACAAAACAAAAATTCAGTTTGCTTTAGCT TATGAGAACGGTAGTTTAGCAAGGGTAAGTAATGGAAAGGTTGTATTGAAGATATTTGACGATAGTGGATTATTGTTTAA TAAAACATACTACATTAATGAACTTCCCTTAAAAGCTGGATATTACTATGAGATTGAATTGCCAAAAATTAAAGGCTTTT ATAAAAATGCAAAATTTGTATTGACATTTAAAAATGATAATGTGAATTTATCAAAAACAACCTATGGAACAATTGAAAGA TATTCTGAAGAAGAAATGAAAGAAATATTTGAAAAAGAATATCATGAAAACTCAATAAAAACTAATATAGAAGAATTTAG GGATGTTGTGGGGATAAAATTCACTGTAAAAGAATATGGATATTATAAAATTTATAACAATCAAACTGACAGAATTGAAA AAGTATTTAGAGTTGATTTTGTAGCTAAAAACTTAAATCCTGACACATATGAATTTGCTCCTATAGGAGTGTGTTTAATT TCTGGAGATAAAAAATATTGGAAAATTGGAGGACTTGATGAAATAGAAATTGGAATTAATCAAGAGATTGCGGGATATTG GATATTCAACAAACCAGATAGTATAGAAAATCTAAGATTAGATTTTAAAATGGGAAATATCGTTTATGACATCCCATTAA CACAAAATAATTTAAAATAA
Upstream 100 bases:
>100_bases AATTGGTAAGAAGGTTATTCCAGCATTAAAAGAGTAAATTAACTTAACTTTTCTTTTTTTATTTTAATTTTTTATATTTT TTGTTTTATTTGGTGATAGT
Downstream 100 bases:
>100_bases TTTAGTAATTCTTCTAAAAATATTTTAATTTTTATAATTTTTGCAAGTATTTAATAATATTTGCCATAGCCACACACCCA TCTCCTACAGCTTTAGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKEIKYMYIVKEGNKTKIQFALA YENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAGYYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIER YSEEEMKEIFEKEYHENSIKTNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK
Sequences:
>Translated_299_residues MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKEIKYMYIVKEGNKTKIQFALA YENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAGYYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIER YSEEEMKEIFEKEYHENSIKTNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK >Mature_299_residues MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKEIKYMYIVKEGNKTKIQFALA YENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAGYYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIER YSEEEMKEIFEKEYHENSIKTNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1535_METJA (Q58930)
Other databases:
- EMBL: L77117 - PIR: F64491 - RefSeq: NP_248543.1 - ProteinModelPortal: Q58930 - GeneID: 1452443 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1535 - NMPDR: fig|243232.1.peg.1580 - TIGR: MJ1535 - OMA: KFTVKEY - ProtClustDB: CLSK876612 - BioCyc: MJAN243232:MJ_1535-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34959; Mature: 34959
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xed508f4)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKE CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEE IKYMYIVKEGNKTKIQFALAYENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAG EEEEEEEECCCCEEEEEEEEECCCCEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCC YYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIERYSEEEMKEIFEKEYHENSIK EEEEEECCCCCCEECCCEEEEEEECCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHH TNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI CCHHHHHHHHCEEEEEECCCEEEEECCCHHHHHHHHHEEEEEECCCCCCEEEEEEEEEEE SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK ECCCCEEEECCCCEEEECCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCH >Mature Secondary Structure MKRLFFIFVMLIVLLCGCTSNKTTNVNNEININKIETNKTLENESLIQKTEKNQLAKIKE CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEE IKYMYIVKEGNKTKIQFALAYENGSLARVSNGKVVLKIFDDSGLLFNKTYYINELPLKAG EEEEEEEECCCCEEEEEEEEECCCCEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCC YYYEIELPKIKGFYKNAKFVLTFKNDNVNLSKTTYGTIERYSEEEMKEIFEKEYHENSIK EEEEEECCCCCCEECCCEEEEEEECCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHH TNIEEFRDVVGIKFTVKEYGYYKIYNNQTDRIEKVFRVDFVAKNLNPDTYEFAPIGVCLI CCHHHHHHHHCEEEEEECCCEEEEECCCHHHHHHHHHEEEEEECCCCCCEEEEEEEEEEE SGDKKYWKIGGLDEIEIGINQEIAGYWIFNKPDSIENLRLDFKMGNIVYDIPLTQNNLK ECCCCEEEECCCCEEEECCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087