| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is pstK [H]
Identifier: 15669733
GI number: 15669733
Start: 1515886
End: 1516644
Strand: Direct
Name: pstK [H]
Synonym: MJ1538
Alternate gene names: 15669733
Gene position: 1515886-1516644 (Clockwise)
Preceding gene: 15669730
Following gene: 15669734
Centisome position: 91.05
GC content: 26.48
Gene sequence:
>759_bases TTGGGGGATATCATGTTAATCATTTTAACAGGGCTGCCAGGGGTTGGGAAATCAACGTTTTCAAAGAATTTAGCAAAAAT TTTGAGTAAAAACAACATTGATGTCATAGTTTTAGGAAGTGATTTGATTAGGGAGAGTTTTCCAGTATGGAAGGAGAAAT ATGAGGAGTTTATTAAAAAATCAACATACCGCTTAATAGACTCTGCTTTAAAAAACTATTGGGTTATTGTTGATGACACC AACTATTATAACTCAATGAGGAGAGATTTAATAAATATAGCCAAAAAATACAACAAAAACTATGCCATAATATATTTAAA AGCTTCTTTAGATGTTTTAATTAGAAGAAATATTGAGAGAGGGGAAAAAATACCAAACGAAGTGATTAAAAAGATGTATG AGAAATTTGATGAGCCAGGGAAGAAATATAAATGGGATGAGCCATTTTTAATAATAGATACAACAAAAGACATTGATTTT AATGAAATAGCTAAAAAATTAATTGAAAAAAGTAAGGAAATTCCTAAATTTTATGTTTTAGAGGAAAATAAAAATAAAAA CAACAATATTTCTGATAAAATTGATAAGGAGACAAGAAAAATTGTAAGTGAATATATAAAATCTAAAAAATTAGATAAAG ATAAAATTAAAGAGGTTGTAGAATTAAGAAAAGAATTTTTAAAGAAAATAAAAAAGATGGAAGAGGTTGATGCTGATAGG GTATTAAAAGAATTTAAAGATTTACTCAATAGCTATTGA
Upstream 100 bases:
>100_bases GACTTTCGCAGTTCATATATTTCATAATGCAGTTGGATGCCTTTAGGCATCAGTTCCTTAAAAAATTTTTATCTCTGCGA AAGTCCTATTAAAAATAAGT
Downstream 100 bases:
>100_bases ACAGATGGATACCTTTAAATATCTCCAAAGATATAAGATATAAACGCAGAATACTACAACAAAATTGTGGGGATAGATAT GTCAGAAGAAAAAGAAGTTA
Product: chromatin associated protein KTI12
Products: NA
Alternate protein names: O-phosphoseryl-tRNA(Sec) kinase; PSTK [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNYWVIVDDT NYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDF NEIAKKLIEKSKEIPKFYVLEENKNKNNNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADR VLKEFKDLLNSY
Sequences:
>Translated_252_residues MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNYWVIVDDT NYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDF NEIAKKLIEKSKEIPKFYVLEENKNKNNNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADR VLKEFKDLLNSY >Mature_251_residues GDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNYWVIVDDTN YYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDFN EIAKKLIEKSKEIPKFYVLEENKNKNNNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADRV LKEFKDLLNSY
Specific function: Specifically phosphorylates seryl-tRNA(Sec) to O- phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis [H]
COG id: COG4088
COG function: function code F; Predicted nucleotide kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L-seryl-tRNA(Sec) kinase family [H]
Homologues:
Organism=Homo sapiens, GI224465209, Length=284, Percent_Identity=23.943661971831, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013641 - InterPro: IPR020024 [H]
Pfam domain/function: PF08433 KTI12 [H]
EC number: =2.7.1.164 [H]
Molecular weight: Translated: 29884; Mature: 29753
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKK CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHH STYRLIDSALKNYWVIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIER HHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHH GEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDFNEIAKKLIEKSKEIPKFYVL HHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEE EENKNKNNNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADR ECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH VLKEFKDLLNSY HHHHHHHHHHCC >Mature Secondary Structure GDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKK CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHH STYRLIDSALKNYWVIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIER HHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHH GEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDFNEIAKKLIEKSKEIPKFYVL HHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEE EENKNKNNNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADR ECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH VLKEFKDLLNSY HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]