| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669651
Identifier: 15669651
GI number: 15669651
Start: 1429935
End: 1430423
Strand: Reverse
Name: 15669651
Synonym: MJ1460
Alternate gene names: NA
Gene position: 1430423-1429935 (Counterclockwise)
Preceding gene: 15669652
Following gene: 15669646
Centisome position: 85.91
GC content: 27.4
Gene sequence:
>489_bases GTGGCTTTTATGGAAAAAATCTTTCCAGACATTTTAGAAGCAATAAGAAATGAAGAGATAATAAAAGAAAGTAAAAAAAT TCCTATGCCATATTTTGGGTTGTTTGCATTGGTAATATTTGATAAAGTTAAAGAACTTGGTTCAGAAACCTCATTATATG AAATTGGTGAAGAATTTGGAAAAATGTTATCTCCTAAAAATATTGAAGAATTGAAAAAAATATTCAAATTAATGAATTTT GGAGATTTGGAGATTGACGAAAATAAAATACTTCTCAAAAATCCACCATATAAAATAAAGCTATCTAATCCTCCATACCA ATGGGTATCTAAAGAAGAACCAATTCATGATTTTATAGCTGGAATCTTAGCTGGATGTTTAGAAGAGATATTTAAAAAGA AATTTGTTGTTAATGAGGTTGAATGTGTTTCTCAAGGAAAAGATAAATGTGTGTTTGAAGTTAAGGAAGTTGATGAGCTA AATAAATAA
Upstream 100 bases:
>100_bases TAATATTTATTATTACAAAGTTTTATATATTTTGTTTTACATAGATGTTATTGATTAGGTCATAACACTAAATAATTAAA AAATATATTAAAAAAGAAAG
Downstream 100 bases:
>100_bases ATCAACCAACTGCATATCTTTAACCAAACCTTTATCAGTTATTTTTAGCTCAGGAATCACAGGGAGAGAGAAAAAGCTCA TACTTAAAAATGGGTTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNF GDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDEL NK
Sequences:
>Translated_162_residues MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNF GDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDEL NK >Mature_161_residues AFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNFG DLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDELN K
Specific function: Unknown
COG id: COG1719
COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1460_METJA (Q58855)
Other databases:
- EMBL: L77117 - PIR: C64482 - RefSeq: NP_248464.1 - PDB: 2OSD - PDB: 2OSO - PDBsum: 2OSD - PDBsum: 2OSO - ProteinModelPortal: Q58855 - SMR: Q58855 - GeneID: 1452364 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1460 - NMPDR: fig|243232.1.peg.1501 - TIGR: MJ1460 - HOGENOM: HBG538985 - OMA: FALVIFD - ProtClustDB: CLSK2517734 - BioCyc: MJAN243232:MJ_1460-MONOMER - InterPro: IPR004096
Pfam domain/function: PF02830 V4R
EC number: NA
Molecular weight: Translated: 18783; Mature: 18652
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFG CCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KMLSPKNIEELKKIFKLMNFGDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIA HHCCCCCHHHHHHHHHHHCCCCCEECCCEEEEECCCEEEEECCCCHHHCCCCCCHHHHHH GILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDELNK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure AFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFG CHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KMLSPKNIEELKKIFKLMNFGDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIA HHCCCCCHHHHHHHHHHHCCCCCEECCCEEEEECCCEEEEECCCCHHHCCCCCCHHHHHH GILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDELNK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087