| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669577
Identifier: 15669577
GI number: 15669577
Start: 1334289
End: 1335428
Strand: Reverse
Name: 15669577
Synonym: MJ1387
Alternate gene names: NA
Gene position: 1335428-1334289 (Counterclockwise)
Preceding gene: 15669579
Following gene: 15669575
Centisome position: 80.21
GC content: 29.04
Gene sequence:
>1140_bases ATGTTTCTATTAGACCCATTTTCTGGAATTAGTGGAGATATGTTCTTATCAGCAATGATTGATTTTGTTGATAAAGAAGA TTTTATAAATACAATTAAAAAAGTTATTGATGTAGAGATTGAGATAAAAAAGGTAAAGAAATGTCATATATTAGCTAACA AAGTTAATATAATCCCAAAGTGTATTAATTGTAATGCAAACACTTATAAAGATATTAAAAACGTTATTAAAAGTTCTGAT ATTCAAGAAGATATTAAAATTACTGCCTTAGAAATTCTAAAGATATTGGCTGAGGCAGAAAGCAAAGTGCATAATGTGGA TGTTGAAAATGTTCATTTCCATGAAGTTGGGAATTATGATACAATTGCCGATATTGTTGGGGCAGCATATATTATAAACA AGTTAAATCTAAAAAATAACTGCTTATATAAGCCAATAAATGTTGGAAATGGTTTTGTAAGGACAGAACATGGATTACTA CCAGTTCCAGCTCCAGCTACGGCTGAGATATTGAAAGGACTTAAAATATTTTTTTCTGATATAAATGAAGAGCTAACAAC ACCTACTGGATCAGCTATTATAAAGTATATAAATCCAAAATTAGCTAAAGGGGCTTTTATTATAAAAGAAGTTTCTTATG GAGCTGGAGATAAGGATTTAAATCTTTTAAATGCCTTAAGAGTTTTTAGAGTTGAAGATATAAAGAGGGAGGATATAGTT TTATTAGAAACGAACGTTGATGACATTTCAGCAGAGATTTTAGGCTATTTATATGAAGTTTTAGATGGAAAAGTTAGGGA TTTGCATTTTATCCCTACATATATGAAGAAGAACAGACCAGCTTATACAATTAGGGCTATTGTTGATAGAGATATAGCTG AGGAGGTAGCCAAAATTATAATGAGGGAGACTGGTAGTTTAGGGGTTAGAATATTTGATATAGAGAGAATAACAGCTGAT AGAGAATTTAAAACTATAAAATTGTTTGATGAATCTGTTAGATTAAAAGTTGGGAGAGTTAATGATGAAATAATCTCTCA AAAACCAGAGTTTGAGGATTTGAAGAACATTGCTAAAAAATATGGCATTCCTTTAAAAGATTTATATAAGTTAATAAATA TTTCCCAAATTAAAAATTAG
Upstream 100 bases:
>100_bases TAATCTTAATTTTTAAGTGTGTGACAGTTAGGTTAAACTTTTTATTAGTATTATCAGTATATTAATAACTTAAACTCTAA AAAATAGAGAGGAGATTTTT
Downstream 100 bases:
>100_bases ATTTACAAATCTTTTTTTAGATACCTTATTATAATCCAAAAACCAATACCTAATAACGCTCCAGCTATAAAGTTATCTAA TAACATTCCAACACCTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPKCINCNANTYKDIKNVIKSSD IQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYDTIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLL PVPAPATAEILKGLKIFFSDINEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITAD REFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLINISQIKN
Sequences:
>Translated_379_residues MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPKCINCNANTYKDIKNVIKSSD IQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYDTIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLL PVPAPATAEILKGLKIFFSDINEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITAD REFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLINISQIKN >Mature_379_residues MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPKCINCNANTYKDIKNVIKSSD IQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYDTIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLL PVPAPATAEILKGLKIFFSDINEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITAD REFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLINISQIKN
Specific function: Unknown
COG id: COG1641
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0272 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1387_METJA (Q58782)
Other databases:
- EMBL: L77117 - PIR: B64473 - RefSeq: NP_248390.1 - ProteinModelPortal: Q58782 - SMR: Q58782 - GeneID: 1452290 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1387 - NMPDR: fig|243232.1.peg.1427 - TIGR: MJ1387 - HOGENOM: HBG733311 - OMA: IVGTCLG - ProtClustDB: PRK04194 - BioCyc: MJAN243232:MJ_1387-MONOMER - HAMAP: MF_01074 - InterPro: IPR002822 - TIGRFAMs: TIGR00299
Pfam domain/function: PF01969 DUF111
EC number: NA
Molecular weight: Translated: 42869; Mature: 42869
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPK CEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCC CINCNANTYKDIKNVIKSSDIQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYD EECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH TIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLLPVPAPATAEILKGLKIFFSD HHHHHHHHHHHHHHCCCCCCCEECEEECCCCEEEECCCEECCCCCCHHHHHHHHHHHHHH INEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV HHHHHCCCCHHHHHHHCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEE LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKII EEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHH MRETGSLGVRIFDIERITADREFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKK HHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHCCCCCHHHHHHHHHH YGIPLKDLYKLINISQIKN HCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPK CEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCC CINCNANTYKDIKNVIKSSDIQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYD EECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH TIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLLPVPAPATAEILKGLKIFFSD HHHHHHHHHHHHHHCCCCCCCEECEEECCCCEEEECCCEECCCCCCHHHHHHHHHHHHHH INEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV HHHHHCCCCHHHHHHHCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEE LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKII EEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHH MRETGSLGVRIFDIERITADREFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKK HHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHCCCCCHHHHHHHHHH YGIPLKDLYKLINISQIKN HCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087