Click here to switch to the map view.

The map label for this gene is 15669565

Identifier: 15669565

GI number: 15669565

Start: 1322945

End: 1324192

Strand: Reverse

Name: 15669565

Synonym: MJ1375

Alternate gene names: NA

Gene position: 1324192-1322945 (Counterclockwise)

Preceding gene: 15669567

Following gene: 15669558

Centisome position: 79.53

GC content: 28.45

Gene sequence:

>1248_bases
ATGAGTTTGTGTAAGGATAGTATTTACATCCTAATGTCAAATTTATACTCAAAGGGAATGGCATATCTATTTTATTTTAT
AACTGCATTTTTATTGGGAACTGAAGCATTTGGTATCTTAAAGGGATTAATGCCAATAGCTGACACTCTAACAATATTTT
TCTCTTCTGGTATTCCTCCAGCCATAGCAAAATTCTTAGCTGAAGAAAAAGAGGTAGATATTAACAAATATATTCCAATA
TTATATTTAATGATTTTGCTCTCAGTTGTTGGATTTATCTTAACTCCTTATATAAAATACATTTTAGGAGGGCATTATTT
AAATCTGCCAAATATTTTGTATTTTGCAGTAGGTCTTTGTGTTGTAGCTTCAACAGTAATAGCATTTTCAAGAGGTATTT
TACAAGGATTGTTAAAGATGAAATATCTCTCCCTTACGTGGATTGTTGAATACACTGCAAAAGTCATATTGGTTTTTATT
CTAACTCTATATTTGGGAATCTTTGGCTCTTTGTTATCAATATCTTTGGCATATTTAGTAGGAGGGATTTTTGGGCTATA
TTTGATTTATAAGGCATTAAAAGGAAAATTTGATTTCAAAAAATTAATTGACATAAAAAATACAACAAAAAACATATTCT
CTAATTTTAACTTAGACATTTTGAGATATTCAATCCCTATTGCTTTAACGTCATCATCATACAGATTGTTTGGAGATATT
GATAATATAGTTATAATGTCCATTATGGGAGGATTTTGGAGTGGGATTTATGGTTACTCCTCTCTAATATCAAGAGGAAT
ATTTATGTTTGCTTCAGCTGTTAGCATCCCTTTACTTCCAAGAATATCTAAAACTAAAGATTTAAGCTTATTAAAAGAAG
GAATTATCCAAAACACTATCTTCTCATCAATTTTTGTTATTGGTTGTTTGTTTTTCCCTGAAATCCCATTGATAGCATTT
TTTAAAACAGCTAATCCAGAAGGAATTTTATGCCTAAGAATTTTAGCAATCTCTTCTTTATTTATGAGCTATTATACTTT
AATATCCTCTGCACTTCAAGGTTTAGGGTATGCAAAAATTTCTTTCTATATAATATTGTTTGGGTTGGTGTTAAATATTA
TCTTAAATTTAATTTTGGTAAATGCTTATGGAATTGTTGGAGGAAGCTTAGCTACATTAATAACATCAATATCTGTCTTT
TTAATTGGTGTTTTTGCTATTTTAAGAATAAAAAAGCATATTATTTAA

Upstream 100 bases:

>100_bases
TCTTTTCTTCCCATAGTTTCACCACAAATTTTAAAAATATTAAATGTAATTTTTAAAGAAATAATAGGTAATAAAATAAA
CTTAGGAAAAGCTGATTCTT

Downstream 100 bases:

>100_bases
TTAGCTGATACTTATACTTTCCATTTAAAAGCTCAACTTTCAGTCCTAATCTTGCTGGAATAACCTCTATTCCAGTATTT
TGGGAAATATATTCTGCCTC

Product: SpoVB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSLCKDSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPPAIAKFLAEEKEVDINKYIPI
LYLMILLSVVGFILTPYIKYILGGHYLNLPNILYFAVGLCVVASTVIAFSRGILQGLLKMKYLSLTWIVEYTAKVILVFI
LTLYLGIFGSLLSISLAYLVGGIFGLYLIYKALKGKFDFKKLIDIKNTTKNIFSNFNLDILRYSIPIALTSSSYRLFGDI
DNIVIMSIMGGFWSGIYGYSSLISRGIFMFASAVSIPLLPRISKTKDLSLLKEGIIQNTIFSSIFVIGCLFFPEIPLIAF
FKTANPEGILCLRILAISSLFMSYYTLISSALQGLGYAKISFYIILFGLVLNIILNLILVNAYGIVGGSLATLITSISVF
LIGVFAILRIKKHII

Sequences:

>Translated_415_residues
MSLCKDSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPPAIAKFLAEEKEVDINKYIPI
LYLMILLSVVGFILTPYIKYILGGHYLNLPNILYFAVGLCVVASTVIAFSRGILQGLLKMKYLSLTWIVEYTAKVILVFI
LTLYLGIFGSLLSISLAYLVGGIFGLYLIYKALKGKFDFKKLIDIKNTTKNIFSNFNLDILRYSIPIALTSSSYRLFGDI
DNIVIMSIMGGFWSGIYGYSSLISRGIFMFASAVSIPLLPRISKTKDLSLLKEGIIQNTIFSSIFVIGCLFFPEIPLIAF
FKTANPEGILCLRILAISSLFMSYYTLISSALQGLGYAKISFYIILFGLVLNIILNLILVNAYGIVGGSLATLITSISVF
LIGVFAILRIKKHII
>Mature_414_residues
SLCKDSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPPAIAKFLAEEKEVDINKYIPIL
YLMILLSVVGFILTPYIKYILGGHYLNLPNILYFAVGLCVVASTVIAFSRGILQGLLKMKYLSLTWIVEYTAKVILVFIL
TLYLGIFGSLLSISLAYLVGGIFGLYLIYKALKGKFDFKKLIDIKNTTKNIFSNFNLDILRYSIPIALTSSSYRLFGDID
NIVIMSIMGGFWSGIYGYSSLISRGIFMFASAVSIPLLPRISKTKDLSLLKEGIIQNTIFSSIFVIGCLFFPEIPLIAFF
KTANPEGILCLRILAISSLFMSYYTLISSALQGLGYAKISFYIILFGLVLNIILNLILVNAYGIVGGSLATLITSISVFL
IGVFAILRIKKHII

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1375_METJA (Q58770)

Other databases:

- EMBL:   L77117
- PIR:   F64471
- RefSeq:   NP_248378.1
- ProteinModelPortal:   Q58770
- GeneID:   1452278
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1375
- NMPDR:   fig|243232.1.peg.1415
- TIGR:   MJ1375
- HOGENOM:   HBG541064
- OMA:   IFMFASA
- ProtClustDB:   CLSK876555
- BioCyc:   MJAN243232:MJ_1375-MONOMER
- InterPro:   IPR002528
- InterPro:   IPR002797
- PANTHER:   PTHR11206

Pfam domain/function: PF01943 Polysacc_synt

EC number: NA

Molecular weight: Translated: 45989; Mature: 45858

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe40c360)-; HASH(0xe3af9b0)-; HASH(0xb26ada0)-; HASH(0xe61ba30)-; HASH(0xe43a7c0)-; HASH(0xe9fd478)-; HASH(0xe343784)-; HASH(0xea02e1c)-; HASH(0xe5707e8)-; HASH(0xdfaffb8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCKDSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AIAKFLAEEKEVDINKYIPILYLMILLSVVGFILTPYIKYILGGHYLNLPNILYFAVGLC
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVASTVIAFSRGILQGLLKMKYLSLTWIVEYTAKVILVFILTLYLGIFGSLLSISLAYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIFGLYLIYKALKGKFDFKKLIDIKNTTKNIFSNFNLDILRYSIPIALTSSSYRLFGDI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCCCEECCCH
DNIVIMSIMGGFWSGIYGYSSLISRGIFMFASAVSIPLLPRISKTKDLSLLKEGIIQNTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
FSSIFVIGCLFFPEIPLIAFFKTANPEGILCLRILAISSLFMSYYTLISSALQGLGYAKI
HHHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SFYIILFGLVLNIILNLILVNAYGIVGGSLATLITSISVFLIGVFAILRIKKHII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
SLCKDSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AIAKFLAEEKEVDINKYIPILYLMILLSVVGFILTPYIKYILGGHYLNLPNILYFAVGLC
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVASTVIAFSRGILQGLLKMKYLSLTWIVEYTAKVILVFILTLYLGIFGSLLSISLAYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIFGLYLIYKALKGKFDFKKLIDIKNTTKNIFSNFNLDILRYSIPIALTSSSYRLFGDI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCCCEECCCH
DNIVIMSIMGGFWSGIYGYSSLISRGIFMFASAVSIPLLPRISKTKDLSLLKEGIIQNTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
FSSIFVIGCLFFPEIPLIAFFKTANPEGILCLRILAISSLFMSYYTLISSALQGLGYAKI
HHHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SFYIILFGLVLNIILNLILVNAYGIVGGSLATLITSISVFLIGVFAILRIKKHII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087