| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669531
Identifier: 15669531
GI number: 15669531
Start: 1287920
End: 1288264
Strand: Direct
Name: 15669531
Synonym: MJ1340
Alternate gene names: NA
Gene position: 1287920-1288264 (Clockwise)
Preceding gene: 15669530
Following gene: 15669533
Centisome position: 77.35
GC content: 40.0
Gene sequence:
>345_bases ATGATTGATAGGGTTTTGTTGGAGTTGAATAAGACTGAGGGTATTAAGGGTTCTATGGTTGTTGGTAAGGATGGTTTAGT TATTGCCTCTCAATTGCCTGGGAGTGTTGATGCTGAGTTAGTTGGGGCTATGGCTTCAGCAGCATTTGGGGCTGCTGAAA GAACAGCAGCAGAAATTGGAATGGGTACTTTAGAACAAACAATGATTGAAGGAGAGCACGGTAAAACCCTAATGGTCGAT GCAGGAGAGGGAATTTTAGTAGTCCTAACTGATGCGAAAGTTAATTTAGGTTTAATCAGAATAACAATGAAAAGAGCCGC AGAAAAAATAAAAGCAATGTTCTAA
Upstream 100 bases:
>100_bases TTATAAATAAAATTATGTCCCACACATAACAAATAAATTTAAAAAATTATATATAGCAAAAACGCATAATTTACATAAGC CAGAGTATAAGGGTGAAAAT
Downstream 100 bases:
>100_bases AATAATATTATAATTATAAAATAGAGCTTAATGCTATAATAATTTCATTGATAACTTCTCTGTTCAATTCAGAGATATCA ATTTTCTTTGTTTCAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIGMGTLEQTMIEGEHGKTLMVD AGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF
Sequences:
>Translated_114_residues MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIGMGTLEQTMIEGEHGKTLMVD AGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF >Mature_114_residues MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIGMGTLEQTMIEGEHGKTLMVD AGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF
Specific function: Unknown
COG id: COG2018
COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0310 and MJ1340 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004942 [H]
Pfam domain/function: PF03259 Robl_LC7 [H]
EC number: NA
Molecular weight: Translated: 11886; Mature: 11886
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIG CCCCEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHC MGTLEQTMIEGEHGKTLMVDAGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF CCCHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHCC >Mature Secondary Structure MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIG CCCCEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHC MGTLEQTMIEGEHGKTLMVDAGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF CCCHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]