Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669498

Identifier: 15669498

GI number: 15669498

Start: 1254107

End: 1254433

Strand: Reverse

Name: 15669498

Synonym: MJ1308

Alternate gene names: NA

Gene position: 1254433-1254107 (Counterclockwise)

Preceding gene: 15669499

Following gene: 15669497

Centisome position: 75.34

GC content: 35.17

Gene sequence:

>327_bases
TTGGTGGATTTTATGGATTATAATGACTTTCAAAAAAAGTTGGATAAAGAAGAGCATGGGGATGGAATCACAGTTGGAGC
AGTTTATACTGGAGAATTTACTCTCTATTTATTGTTTATATTTGGAGCTTTGATTATTGGGAGAGTTTATGGAAAAACTT
TGATGACTTTGTTTGGTTTAGCTGCATTAGCTTTCTCTCTGTCAGTGTCTCCTTTAATCTTTAAGTTTAAGGAAGAGAAC
TCAAATGCCATAAACTACCAGTTGTTTTGGCTCTCCATATTCTTGGGGGCAATTGCATTCTGCATCTATATGACAACAAG
GTGGTAA

Upstream 100 bases:

>100_bases
TAATTGGTCTCTATCCAGACATTGTAACAAACTATCTCTGGGACTATGCAAAGGAGTTAGGGGTTAATTATTATTTAAAA
TAGACAAAATAACTTAATTT

Downstream 100 bases:

>100_bases
AATGAACTCTAAAAGAGATTTAGCTGTTGCCATATCCTTCTTTGTATTTGGGGCATCTGTATTATATAGTTTAGCACACA
TGCAGATTAGTCCAGGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGLAALAFSLSVSPLIFKFKEEN
SNAINYQLFWLSIFLGAIAFCIYMTTRW

Sequences:

>Translated_108_residues
MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGLAALAFSLSVSPLIFKFKEEN
SNAINYQLFWLSIFLGAIAFCIYMTTRW
>Mature_108_residues
MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGLAALAFSLSVSPLIFKFKEEN
SNAINYQLFWLSIFLGAIAFCIYMTTRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1308_METJA (Q58704)

Other databases:

- EMBL:   L77117
- PIR:   C64463
- RefSeq:   NP_248308.1
- ProteinModelPortal:   Q58704
- GeneID:   1452210
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1308
- NMPDR:   fig|243232.1.peg.1345
- TIGR:   MJ1308
- HOGENOM:   HBG538964
- OMA:   NAINYQL
- ProtClustDB:   CLSK876521
- BioCyc:   MJAN243232:MJ_1308-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12337; Mature: 12337

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdaee254)-; HASH(0xe5d82ac)-; HASH(0xd759668)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGL
CCCCCCCCHHHHHCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALAFSLSVSPLIFKFKEENSNAINYQLFWLSIFLGAIAFCIYMTTRW
HHHHHHHCCCHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGL
CCCCCCCCHHHHHCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALAFSLSVSPLIFKFKEENSNAINYQLFWLSIFLGAIAFCIYMTTRW
HHHHHHHCCCHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087