Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669482

Identifier: 15669482

GI number: 15669482

Start: 1240409

End: 1241122

Strand: Direct

Name: 15669482

Synonym: MJ1292.1

Alternate gene names: NA

Gene position: 1240409-1241122 (Clockwise)

Preceding gene: 15669481

Following gene: 15669483

Centisome position: 74.5

GC content: 28.43

Gene sequence:

>714_bases
ATGGGAGTTAGAGAGTGTGTAGTAACAAGGATTATTAAATCAAGACCAATAATTGCTTGTGAGGATGTATATCTGCACAA
TTACACTGTCTTTATAAAAATAAGAAATAGAACGCAGGGATTTGTGAAGTATGAGCCAATTGTTGGATATCCTGTTAATG
TTACAGTTTCTCTAAAAAGTGCTGTTCCAGATTTAAAAGATATAGAAATCTGGGCTTCTGCAATGGATGAAAATGGCAGA
TTAATAAACTGTAGTAAAAAGAAAACCATCGATATTTACGGAAATTATAGAAAAGTTAATCTTGAAATTTTATTCAATGA
CTCATTAGAGGGATATTTAATAATATATGCTAAAACTGGGGAGGCAGTTATTCCTCTATATTATAAACCAATTATGGTCA
CCTATCCGGTAGTATTTGGTTTAGAATACAATCCTTCAGACCCTTGGGCAAATCTAACACTATCTCATAATTATCAAGTT
CCTATAAAGGTTAATGCTACAATAGGTAAATATTCCAAAATAATAACAATCTACCCATATAAAGAGACAAAAGTTCCGTT
TTATGTTGGGAAAGATAGAAACAATATAACTGTAAGCATTGAACTACTTAATAATATATCAACGATAAAAAAATTCAAAA
AAACATTTTATTTCAAAAAATTAAATAAAATTAAAACTTCTATTAATGAAACAGTAGTTAACAAATATAATTAA

Upstream 100 bases:

>100_bases
AGTATTTAAAAATTGGAACAATGGAAGAGATTCCTGTAAATATAAAAACGCTATTTTTAAAGGAATACACGGCCCTATCT
ACATACACGTTGCTACAAAT

Downstream 100 bases:

>100_bases
TATAACAAACGAAACTAAAATATACAACCAAACTGAAAAAGGAAAAATGACAAATAAAACCAGAAAGGAAACAAATGAAA
TTAAAAATAATATCACCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKSAVPDLKDIEIWASAMDENGR
LINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTGEAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQV
PIKVNATIGKYSKIITIYPYKETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN

Sequences:

>Translated_237_residues
MGVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKSAVPDLKDIEIWASAMDENGR
LINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTGEAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQV
PIKVNATIGKYSKIITIYPYKETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN
>Mature_236_residues
GVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKSAVPDLKDIEIWASAMDENGRL
INCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTGEAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQVP
IKVNATIGKYSKIITIYPYKETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YC9A_METJA (P81333)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_248292.1
- ProteinModelPortal:   P81333
- GeneID:   1452194
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1292.1
- NMPDR:   fig|243232.1.peg.1329
- TIGR:   MJ1292.1
- BioCyc:   MJAN243232:MJ_1292.1-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27349; Mature: 27218

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKS
CCHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCCCEEEECCEECCCEEEEEEEHH
AVPDLKDIEIWASAMDENGRLINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTG
CCCCCHHHEEEEECCCCCCCEEEECCCEEEEEEECEEEEEEEEEECCCCCEEEEEEEECC
EAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQVPIKVNATIGKYSKIITIYPY
CEEEEEEECCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEEEEC
KETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN
CCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
GVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKS
CHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCCCEEEECCEECCCEEEEEEEHH
AVPDLKDIEIWASAMDENGRLINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTG
CCCCCHHHEEEEECCCCCCCEEEECCCEEEEEEECEEEEEEEEEECCCCCEEEEEEEECC
EAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQVPIKVNATIGKYSKIITIYPY
CEEEEEEECCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEEEEC
KETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN
CCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087