| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669359
Identifier: 15669359
GI number: 15669359
Start: 1110272
End: 1110541
Strand: Direct
Name: 15669359
Synonym: MJ1170
Alternate gene names: NA
Gene position: 1110272-1110541 (Clockwise)
Preceding gene: 15669358
Following gene: 15669360
Centisome position: 66.68
GC content: 34.07
Gene sequence:
>270_bases GTGATTTTGATGATAACTTCCACAACTGACAACTTAGAAGGTTTTAAAATTGTAAAATATTTGGGTGTTGTAATCGGCTA TGGTGATGACCCAGACGATGCCTTAGAAGATTTAATAGATGTAGCTGAAGATATGGGAGCTAATGCAGTTATTGGAATAA GAATCTCTAATGAATTAACAACTGAAATCATATCTGATGAAAACTATGCAGTTCCAGAATTAACCTACTATGCATATGGA ACGGCTGTTATAGTTGAGAAAATTGACTGA
Upstream 100 bases:
>100_bases ACCCAGTTTCAGATGAATATGCAAACAGCTGGAGAGTTATAAAGATAGATGCAACTGATATAAACTAAATATCCTTTTCT TTCTAAAATTTAATTTTTAA
Downstream 100 bases:
>100_bases TAAAAAATAATAAGCCGGTGATGGTATGAAGGAGTTAATTCTAACATTACAAAAGGAAATTATTGTTCCAGTAGAGATGG ATAAAGTATTGCCAGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MILMITSTTDNLEGFKIVKYLGVVIGYGDDPDDALEDLIDVAEDMGANAVIGIRISNELTTEIISDENYAVPELTYYAYG TAVIVEKID
Sequences:
>Translated_89_residues MILMITSTTDNLEGFKIVKYLGVVIGYGDDPDDALEDLIDVAEDMGANAVIGIRISNELTTEIISDENYAVPELTYYAYG TAVIVEKID >Mature_89_residues MILMITSTTDNLEGFKIVKYLGVVIGYGDDPDDALEDLIDVAEDMGANAVIGIRISNELTTEIISDENYAVPELTYYAYG TAVIVEKID
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family. Highly divergent
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1170_METJA (Q58570)
Other databases:
- EMBL: L77117 - PIR: A64446 - RefSeq: NP_248164.1 - ProteinModelPortal: Q58570 - SMR: Q58570 - GeneID: 1452068 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1170 - NMPDR: fig|243232.1.peg.1201 - TIGR: MJ1170 - OMA: ELTYYAY - ProtClustDB: CLSK2517698 - BioCyc: MJAN243232:MJ_1170-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 9722; Mature: 9722
Theoretical pI: Translated: 3.51; Mature: 3.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMITSTTDNLEGFKIVKYLGVVIGYGDDPDDALEDLIDVAEDMGANAVIGIRISNELT CEEEEECCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCE TEIISDENYAVPELTYYAYGTAVIVEKID EEEECCCCCCCCCEEEEEECEEEEEEECC >Mature Secondary Structure MILMITSTTDNLEGFKIVKYLGVVIGYGDDPDDALEDLIDVAEDMGANAVIGIRISNELT CEEEEECCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCE TEIISDENYAVPELTYYAYGTAVIVEKID EEEECCCCCCCCCEEEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087